Amino-acid transporter protein (polypeptide) - C. hemisphaerica

Overview
NameAmino-acid transporter protein
Unique NameTCONS_00055355-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length556

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055355-protein ID=TCONS_00055355-protein|Name=Amino-acid transporter protein|organism=Clytia hemisphaerica|type=polypeptide|length=556bp
MSERRFKSEEKSAVNSKLLGQSYGTLFQPGYVRQISRMSWIKSLWKREKL
LIFIVLAVLLGLLVGLLINKPVQELEEPAKGNVLLLVGFPGEILMRMLKM
LILPLIMTSLIVGLADLDQRSSGRLGRRAVLYYMFTTGVAVLLGIILVVS
IKPGSYGGDKEFNKDADQPKTRTMDTILDLLRNMFPENIVQACIEQAATR
AEEITIRTDRVYFPIINGTEMSGTIEAYNSTHNVSITKKTVLISGKTTYR
SGTNVLGVVVFSIAIGLLLGKMGTQAHSFIQWIKIFNELIMKLVQYVMWY
SPIGIWSLVTNKFASMDDISGTFQGLAYYMATVISGLVVHSFIVLPLTYF
VLTRRNPFSFIKGTAQALLTAFGTSSSSATLPVTFKCLEDNNGLDKRVTR
FVLPIGATINMDGTALYEAVAAIFIAQSTGMSLNIGQYIAISLTATLASI
GAAGIPQAGLVTMLMVLQTVGLPEEAVTLIISVDWFLDRIRTTVNVLGDC
IGAGIVAHLSEGDLEKPLENSYENEINIVEDVIRNGSKTSYDIQTKEHRN
ASTTSF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034872XLOC_034872Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055355TCONS_00055355Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001991Na-dicarboxylate_symporter
IPR018107Na-dicarboxylate_symporter_CS
Vocabulary: Molecular Function
TermDefinition
GO:0015293symporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015293 symporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001991Sodium:dicarboxylate symporterPRINTSPR00173EDTRNSPORTcoord: 250..272
score: 49.47
coord: 401..427
score: 89.39
coord: 436..455
score: 68.92
coord: 126..151
score: 54.99
coord: 97..117
score: 63.45
coord: 334..353
score: 52.43
coord: 297..316
score: 43.65
coord: 48..68
score: 33.72
coord: 463..483
score: 51.99
IPR001991Sodium:dicarboxylate symporterGENE3D1.10.3860.10coord: 39..515
e-value: 1.3E-164
score: 547.4
IPR001991Sodium:dicarboxylate symporterPFAMPF00375SDFcoord: 50..508
e-value: 2.5E-136
score: 454.7
IPR001991Sodium:dicarboxylate symporterSUPERFAMILY118215Proton glutamate symport proteincoord: 50..193
coord: 251..509
IPR018107Sodium:dicarboxylate symporter, conserved sitePROSITEPS00714NA_DICARBOXYL_SYMP_2coord: 404..427
IPR018107Sodium:dicarboxylate symporter, conserved sitePROSITEPS00713NA_DICARBOXYL_SYMP_1coord: 90..104

Blast
BLAST of Amino-acid transporter protein vs. Swiss-Prot (Human)
Match: EAA2 (Excitatory amino acid transporter 2 OS=Homo sapiens GN=SLC1A2 PE=1 SV=2)

HSP 1 Score: 467.233 bits (1201), Expect = 1.138e-159
Identity = 246/504 (48.81%), Postives = 341/504 (67.66%), Query Frame = 0
Query:   50 LLIFIVLAVLLGLLVGLLINKPVQELEEPAKGNVLLLVGFPGEILMRMLKMLILPLIMTSLIVGLADLDQRSSGRLGRRAVLYYMFTTGVAVLLGIILVVSIKPGSYGGDKEFNKDADQPKTRTMDTILDLLRNMFPENIVQACIEQAATRAEEITIRTDRVYFPIINGTEMSGTIEAYNSTHNVSITKKTVLISGKTTYRSGTNVLGVVVFSIAIGLLLGKMGTQAHSFIQWIKIFNELIMKLVQYVMWYSPIGIWSLVTNKFASMDDISGTFQGLAYYMATVISGLVVHSFIVLPLTYFVLTRRNPFSFIKGTAQALLTAFGTSSSSATLPVTFKCLEDNNGLDKRVTRFVLPIGATINMDGTALYEAVAAIFIAQSTGMSLNIGQYIAISLTATLASIGAAGIPQAGLVTMLMVLQTVGLPEEAVTLIISVDWFLDRIRTTVNVLGDCIGAGIVAHLSEGDLEKPLENSYENEINIVEDVIRNGSKTSYDIQTKEHRNAST 553
            LL   V  V+LG + G L+      L  P   +V++L+ FPG+ILMRMLKMLILPLI++SLI GL+ LD ++SGRLG RA++YYM TT +A +LG+ILV++I PG+    K+        +  ++D  LDL+RN+FPEN+VQAC +Q  T  +++ +       P       S  +   N T      +  ++I     ++ G NVLG++ F IA G+ +GKMG QA   + +  I NE++MKLV  +MWYSP+GI  L+  K  ++ D+    + L  YM TVI GL++H  I LPL YFV+TR+NPFSF  G  QA +TA GT+SS+ TLPVTF+CLE+N G+DKRVTRFVLP+GATINMDGTALYEAVAAIFIAQ  G+ L+ GQ + +SLTATLAS+GAA IP AGLVTML++L  VGLP E ++L+++VDW LDR+RT+VNV+GD  GAGIV HLS+ +L+     + +++  + ED+    +++ YD   K HR +++
Sbjct:   46 LLTLTVFGVILGAVCGGLL-----RLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKNDEVSSLDAFLDLIRNLFPENLVQACFQQIQTVTKKVLVAPP----PDEEANATSAVVSLLNETVTEVPEETKMVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGDQAKLMVDFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMVTVIIGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVVLDGGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTSVNVVGDSFGAGIVYHLSKSELD-----TIDSQHRVHEDIEMTKTQSIYD-DMKNHRESNS 534          
The following BLAST results are available for this feature:
BLAST of Amino-acid transporter protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EAA21.138e-15948.81Excitatory amino acid transporter 2 OS=Homo sapien... [more]
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