TCONS_00054938-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054938-protein
Unique NameTCONS_00054938-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1204

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054938-protein ID=TCONS_00054938-protein|Name=TCONS_00054938-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1204bp
MKLFHHFVHNLAKNVSTIQGVKKNHVETNPIKHKNETTDKNKGMVSPTLR
HTKNETLGHFKDCAIRKDLPNYTFQNLDHVGYKYKMTRPMSVNDCLTNCC
QHDTCHVAFHQDESCYLLQCSDPALCNAVTRTKKKSRVLYLNKPASTRNI
KPKFCLKQNSGGIVWQQTPAKLNTTQPCPREASGEAKRMCDEHSKWLSPD
FSGCVSKEYAQIKEKTKRLGYSLSATDLIDELEQVTSETIDNSLIFGGNI
KMATESLLQISNFLMNNQKENFNDKGLKGATKIISNLLDDANINEWNNIK
ENQCHNKVMKSLDKLGIYATKKLPDDNKIKTIVTRSILSSIGKITLDNKQ
PPKTKQKQAKQIVSPKQYIFPDYAHVNGDWNRKKDVITLPKNLFDKDRLT
MVSSVVYKSLSQLLPHRWKSQKFVTFTDGFVVNSNILSCIVEPKPLKVLV
SPVIITLHHLKEQHLDRSKCVWWDFNNSGGSWSTEGCEVITSNRTVTVCQ
CHHLTHFAILSSTKEEKISAKEEIKEHTMAIMWLGIPLMIVLTLGVLYTC
FSWSKSPKKSQVVILDKKPVLPKDNVFTTQEINQRYRGSPKKNLYAANPQ
RRQRQSRSSENLYENRTKKSPPITKPSECIPKQNFFGGSNQASHNTPSPS
DLEWEHAWDCLTNSEFDTRNTKRLHEEFKRQLLKNKMIRQQRCLRRKNSS
ESSSSSTDAISEICSHERKRRGVFERYFRWRADEKMEWSKEKINYKVIKE
EKQNLVSPNQDQMESTQDQKPIGRHLKPPLSCHSPNNTINESDHRPLFSP
DAISSPHSMNEFPVSKNVETPYMGQTLTNSNRYLRISFDALDACTDSTLD
SINQIVSDIETNYDDLLLDSQQRLRLQPIHHQKMADISIFIESDDPTTPN
TQLRVNAGSSEDTGYQTSQASYCGSNSEVDVSYDQIKLKNTGKYFRDHIF
TREGFQGFQCNEFCCITYIELLFVSFETKEKGYQYGRRLDLGGVSTTDVS
TDEESDHKKRIYNYKQSKNKRNRFSSTQPSSAMKPLRKLMLENTTVTASG
CRVKRYSARECKVSPTQSGNRNQTRHMKSYIALRQQCRLNDDLSPLSKHK
GLIPNLKSPLETAGAIRKSKLKRKKAFKVSSETDNIGKARQRIMRRENRG
KRTLSRVDTSSDSSSLSSANTSWDSLVQTYQLSEGSSLESHEIEMECNNK
FGDW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034625XLOC_034625Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054938TCONS_00054938Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001879GPCR_2_extracellular_dom
IPR000203GPS
IPR032471GAIN_dom_N
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001879GPCR, family 2, extracellular hormone receptor domainSMARTSM00008HormR_1coord: 151..213
e-value: 1.5E-8
score: 44.4
IPR001879GPCR, family 2, extracellular hormone receptor domainPFAMPF02793HRMcoord: 154..206
e-value: 5.8E-6
score: 26.4
IPR001879GPCR, family 2, extracellular hormone receptor domainGENE3D4.10.1240.10coord: 110..219
e-value: 3.6E-4
score: 20.2
IPR001879GPCR, family 2, extracellular hormone receptor domainPROSITEPS50227G_PROTEIN_RECEP_F2_3coord: 119..208
score: 10.827
IPR000203GPS motifSMARTSM00303GPS_3coord: 466..516
e-value: 9.9E-13
score: 58.3
IPR000203GPS motifPFAMPF01825GPScoord: 469..510
e-value: 1.5E-13
score: 51.1
IPR000203GPS motifPROSITEPS50221GPScoord: 467..516
score: 16.366
IPR032471GAIN domain, N-terminalPFAMPF16489GAINcoord: 225..442
e-value: 2.7E-15
score: 56.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 588..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..711
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1147..1169

Blast
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BLAST of TCONS_00054938-protein vs. Swiss-Prot (Human)
Match: AGRB3 (Adhesion G protein-coupled receptor B3 OS=Homo sapiens GN=ADGRB3 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.885e-26
Identity = 103/428 (24.07%), Postives = 192/428 (44.86%), Query Frame = 0 
Query:  163 IVWQQTPAKLNTTQPCPREASGEAKRMCDEH----SKWLSPDFSGCVSKEYAQIKEKTKR---LGYSLSATDLIDELEQVTSETIDNSLIFGGNIKMATESLLQISNFLMNNQKENFNDKGLKGATKIISNLLDDANINEWNNIKENQCHNKVMKSLDKLGIYATKKLPDDNKIKTIVTRSILSSIGK-----ITLDNKQPPKTKQKQAKQIVSPKQYIFPDYAHVNGDWNR-KKDVITLPKNLF--------DKDRLTMVSSVVYKSLSQLLPHRWKSQKFVTFTDGFVVNSNILSCIVEPKPLKVLVSPVIITLHHLKEQHLDRSKCVWWD---FNNSGGSWSTEGCEVITSNRTVTVCQCHHLTHFAILSSTKEEKISAKEEIKEHTMAIMWLGIPLMIVLTLGVLYTCFSWSKSPKKSQVVILD 566
            +VW++TPA       CP  A+G   R C       + W  P F+ C+S EY  ++   K     G  + A D + ++ +   +       + G++ M+ E L  +++          +D G++   +I+SNLLD+ N  +W + ++    +  +  + +  I+       D +   ++T ++++SI K     +  D   P K ++                      DW R  +D + +PK++F        D+  + ++ +V+YK+L  +LP         T  +  V+NS I+   + P+P K   S + I L HL    L+   CV WD    N S G+WST+GC+ + ++ + T C C  L+ FAIL+    E I         T+ I+  G+  + ++TL V+Y    W     +  +++++
Sbjct:  522 MVWKRTPAGDLAFNQCPLNATGTTSRRCSLSLHGVAFWEQPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTKTLLDLTQRKNFYAGDLLMSVEILRNVTDTFKRASYIPASD-GVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVLTDINFPMKGRKGMV-------------------DWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDLILP---------TLRNYTVINSKIIVVTIRPEP-KTTDSFLEIELAHLANGTLN-PYCVLWDDSKTNESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPREIIMESSGTPSVTL-IVGSGLSCLALITLAVVYAAL-WRYIRSERSIILIN 916
The following BLAST results are available for this feature:
BLAST of TCONS_00054938-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRB32.885e-2624.07Adhesion G protein-coupled receptor B3 OS=Homo sap... [more]
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