TCONS_00054542-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054542-protein
Unique NameTCONS_00054542-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1282

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054542-protein ID=TCONS_00054542-protein|Name=TCONS_00054542-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1282bp
MGYIDWQRIQTADVERISLDEDAAEEYFNLLLNSDLSESDGKLSEADTVV
KLFNVTKAVLNIKGIQYETAVDEMERLMAEKDGGRDGEAVLMAENQELKA
EIAQYQKYSGTGDKYLRGEIQQLTERIKMLTEELNEADRRLMKEQESFDR
LTKDLKDKDQRYHDTKRQLERMQDDVKEYQRQFQSQRDSMIMRRSNADDV
RDQMKEKNRELSRNLDEISELQKANDRLQEEVKNATKEMESATKDMNEMA
DDYSKLKGVLEETDRVMEDMRKEREILRSQVQDMEQQLVRKAEGDDDIMI
ALNKKVAEWKDILAAKDADIESKGKELLSLQKQLHSAKMDSDRNTVIELM
EANDKKDEQIKDLKSRLDLASKDYDEVTGHIKTLKSQTKDGAPSLQQQRK
IQSLNETLQQEQVTIVRERERVIEIEQDIVEKDRQIAELVNRMIQYEKGQ
YGLTEAVQEIKDCRAQIRLRDRNIEDLTREINQLNLDFDDVHLENEEMRD
RLGIGSRDELDVENIRRKRAVKEEQASALNRVLQKEVERLEEERLVLKKA
LRKHALDRGERAVELGLSALDMEPLDEEVVLSPSKSKIIKVIQQPDPVPQ
RENVSSNIPTQDSEVLVLQKMQFEKENTQLKDENRQLELALRELKGAMDS
GDKDINSPSLDKLVAMIEEKHATGQYDTTVHLKSQIQHLSGRNEELRLEL
RSAQLEINKTISELDARAQNIENLEKENGALREISQGIIKLNPLPLPEGI
KPTSKDIIACLNEYIIQILQEISNKETLCSEMESALEDMRRKYSVALHQQ
SIVYKEHLAVKVEKEEESKKYADEKEELLLKKSQTDVRLQEFDRLLDNLS
TEPDQHKKMLTELTRKITVLKVNEKSLTRRYTILQDVEKNLRKQIDKLNK
DFLDMEAAVTSKLGDLERHKETSTYKITALQKALEDTVPLSQLEVTNRQF
NELTAKYRDLLQRENSMMAHSSAFDTMQGELKSHQHREKTLKEKLLLEKE
RAYALENTLNDLVTKLGRNVTPSEAATAEISSVARKLATLEMKELNERER
ANHATIKYDQLRTLVAELENRNAELEQKFAVTSKINLECQRVERDLRDQI
SNSVSAETNRSDRARIIHLEESHATLQTECHKLKEIADIAQHQTEAITMR
HQSQGKETESLRKQLYELQMETDEKTVIAKLHQHIVALQISEVTAVRKYE
VTNTKVKKQDIQIARLNQTVDDKTEEIQHLRNETRSKIRFLKVIIQDLRR
QFSGALPLGQQERFSETLRTLQEKRISLESNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034388XLOC_034388Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054542TCONS_00054542Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 401..442
NoneNo IPR availableCOILSCoilCoilcoord: 512..557
NoneNo IPR availableCOILSCoilCoilcoord: 686..734
NoneNo IPR availableCOILSCoilCoilcoord: 620..650
NoneNo IPR availableCOILSCoilCoilcoord: 881..908
NoneNo IPR availableCOILSCoilCoilcoord: 811..831
NoneNo IPR availableCOILSCoilCoilcoord: 1206..1251
NoneNo IPR availableCOILSCoilCoilcoord: 1051..1085
NoneNo IPR availableCOILSCoilCoilcoord: 772..792
NoneNo IPR availableCOILSCoilCoilcoord: 943..963
NoneNo IPR availableCOILSCoilCoilcoord: 120..189
NoneNo IPR availableCOILSCoilCoilcoord: 460..501
NoneNo IPR availableCOILSCoilCoilcoord: 194..287
NoneNo IPR availableCOILSCoilCoilcoord: 346..373
NoneNo IPR availableGENE3D1.10.287.620coord: 111..255
e-value: 2.0E-12
score: 46.4
NoneNo IPR availableGENE3D1.20.5.340coord: 613..801
e-value: 1.1E-5
score: 24.6
NoneNo IPR availableGENE3D1.20.5.50coord: 344..468
e-value: 0.0026
score: 17.0
coord: 256..343
e-value: 0.022
score: 13.9
NoneNo IPR availableGENE3D1.20.120.330coord: 940..1112
e-value: 0.11
score: 11.6

Blast
BLAST of TCONS_00054542-protein vs. Swiss-Prot (Human)
Match: CE290 (Centrosomal protein of 290 kDa OS=Homo sapiens GN=CEP290 PE=1 SV=2)

HSP 1 Score: 741.11 bits (1912), Expect = 0.000e+0
Identity = 489/1318 (37.10%), Postives = 815/1318 (61.84%), Query Frame = 0
Query:    4 IDWQRIQTADVERISLDEDAAEEYFNLLLN-SDLSESDGKLSEADTVVKLFNVTKAVLNIKGIQYETAVDEMERLMAEKDGGRDGEAVLMAENQ------ELKAEIAQYQKYSGTGD-KYLRGEIQQLTERIKMLTEELNE----------ADRRLMKEQESFDRLTKDLKDKDQRYHDTKRQLERMQDDVKEYQRQFQSQRDSMIMRRSNADDVRDQMKEKNRELSRNLDEISELQKANDRLQEEVKNATKEMESATKDMNEMADDYSKLKGVLEETDRVMEDMRKEREILRSQVQDMEQQLVRKAEGDDDIMIALNKKVAEWKDILAAKDADIESKGKELLSLQKQLHSAKMDSDRNTVIELMEANDKKDEQIKDLKSRLDLASKDYDEVTGHIKTLKS--QTKDGAPSLQQQR--KIQSLNETLQQEQVTIVRERERVIEI-EQDIVEKDRQIAELVNRMIQYEKGQYGLTEAVQEIKDCRAQIRLRDRNIEDLTREINQLNLDFDDVHLENEEMRDRLGIGSRDELDVENIRRKRAVKEEQASALNRVLQKEVERLEEERLVLKKALRKHALDRGERAVELGLSALDM---EPLDEEVVLSPSKSKIIKVIQQPDPVPQRENVSSNIPTQDSEV----LVLQKMQFEKENTQLKDENRQLELALRELKGAMD---------SGDKDINSPSLDKLVAMIEEKHATGQYDTTVHLKSQIQHLSGRNEELRLELRSAQLEINKTISELDARAQNIENLEKENGALREISQGIIKLNPLPLPEGIKPTSKDIIACLNEYIIQILQEISNKETLCSEMESALEDMRRKYSVALHQQSIVYKEHLAVKVEKEEESKKYADEKEELLLKKSQTDVRLQEFDRLLDNLSTEPDQHKKMLTELTRKITVLKVNEKSLTRRYTILQDVEKNLRKQIDKLNKDFLDMEAAVTSKLGDLERHKETSTYKITALQKALEDTVPLSQLEVTNRQFNELTAKYRDLLQRENSMMAHSSAFDTMQGELKSHQHREKTLKEKLLLEKERAYALENTLNDLVTKLGRNVTPSEA----ATAEISSVARKLATLEMKELNERERANHATIKYDQLRTLVAELENRNAELEQKFAVTSKINLECQRVERDLRDQISNSVSAETNRSDRARIIHLEESHATLQTECHKLKEIADIAQHQTEAITMRHQSQGKETESLRKQLYELQMETDEKTVIAKLHQHIVALQISEVTAVRKYEVTNTKVKKQDIQIARLNQTVDDKTEEIQHLRNETRSKIRFLKVIIQDLRRQFSGALPLGQQERFSETLRTLQEKRISL 1278
            I+W+ I   D + +   E+ A+   NLL++ S +  ++ K  + + V+ LF +T++++ +K           E  +A ++  + GE     ENQ      +L+ E+   Q+ +G  D ++LR EI QL ++++    EL +           + +L    E  +     L+ +++R    K++ E++  D+ +YQ+Q  SQ+++++ RR    D R Q+ +KN EL + LDEI  L +AN++++ + +   K +E + ++M +M D+Y+++K ++ +TD V++ ++KE +  + QVQ++   L  K E DD IM+A+N KV EWK IL++KD +I    + L +L+++L +A++D+D++ V+ L +   ++D QIK L  +++  +K+ ++ T  I+ LK+  Q   GA +L QQ   KIQS  + L+++     +E ER  E+ E D  EKD+++ E + R+  YE G YGL +AV EIK+C+ QI++RDR IE LT+EIN+L L   D   ENE +R+R+G+  +  +D+   R  + +K++Q  A N++L KE+E LEEERL LKK +R+ A +RG+R+   GL+  D+   E + +   +S  K  ++ +    +   + E +S  +  ++ ++     V+ K  F+ +  +L +EN+QLE  ++E+  A+           G+  +  PSL++LV  IE K+A G +D ++HLK+Q+  L+GRNEELR ELR ++ E      +L      I++LEKE   LR+     +    + LP+GI P+S  II   NEY+I +LQE+ NKE     +E +LED  RK++V  HQQS++YKE+L+ K   + ESK   +EK +L  +  Q  ++++E++ LL+ L  + D+ KK+L E +RKITVL+VNEKSL R+YT L ++E+ LRK+ +K   + L MEA V  K+G L+R KE + +KI ALQK ++++V LS+LE+ N+Q+NELTAKYRD+LQ++N ++  +S  + ++ E  S + + +++ ++L + KE+ + +E    +  TKLG   +  +A      ++I S+++K+  LEMKELNER+RA H    Y+ LRT + ++E RN ELE KFA  +KINL+ Q+VE+ LRD++++SVS   + +DR RI+ LE++   L+ E  KL+EI+DIA+ Q E +  + QS+ KE ESLR QL + Q ++DEK++IAKLHQH V+LQ+SE TA+ K E   +K++K +    RL Q +D+K + + + R E R++ + L+  IQ LRRQFSGALPL QQE+FS+T+  LQ  ++ +
Sbjct:    5 INWKEIMKVDPDDLPRQEELAD---NLLISLSKVEVNELKSEKQENVIHLFRITQSLMKMKA---------QEVELALEEVEKAGEEQAKFENQLKTKVMKLENELEMAQQSAGGRDTRFLRNEICQLEKQLEQKDRELEDMEKELEKEKKVNEQLALRNEEAENENSKLRRENKRL---KKKNEQLCQDIIDYQKQIDSQKETLLSRRGEDSDYRSQLSKKNYELIQYLDEIQTLTEANEKIEVQNQEMRKNLEESVQEMEKMTDEYNRMKAIVHQTDNVIDQLKKENDHYQLQVQELTDLLKSKNEEDDPIMVAVNAKVEEWKLILSSKDDEIIEYQQMLHNLREKLKNAQLDADKSNVMALQQGIQERDSQIKMLTEQVEQYTKEMEKNTCIIEDLKNELQRNKGASTLSQQTHMKIQSTLDILKEK----TKEAERTAELAEADAREKDKELVEALKRLKDYESGVYGLEDAVVEIKNCKNQIKIRDREIEILTKEINKLELKISDFLDENEALRERVGLEPKTMIDLTEFRNSKHLKQQQYRAENQILLKEIESLEEERLDLKKKIRQMAQERGKRSATSGLTTEDLNLTENISQGDRISERKLDLLSLKNMSEAQSKNEFLSRELIEKERDLERSRTVIAK--FQNKLKELVEENKQLEEGMKEILQAIKEMQKDPDVKGGETSLIIPSLERLVNAIESKNAEGIFDASLHLKAQVDQLTGRNEELRQELRESRKEAINYSQQLAKANLKIDHLEKETSLLRQSEGSNVVFKGIDLPDGIAPSSASIINSQNEYLIHLLQELENKEKKLKNLEDSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEKRKLEDQVQQDAIKVKEYNNLLNALQMDSDEMKKILAENSRKITVLQVNEKSLIRQYTTLVELERQLRKENEKQKNELLSMEAEVCEKIGCLQRFKEMAIFKIAALQKVVDNSVSLSELELANKQYNELTAKYRDILQKDNMLVQRTSNLEHLECENISLKEQVESINKELEITKEKLHTIEQAW-EQETKLGNESSMDKAKKSITNSDIVSISKKITMLEMKELNERQRAEHCQKMYEHLRTSLKQMEERNFELETKFAELTKINLDAQKVEQMLRDELADSVSKAVSDADRQRILELEKNEMELKVEVSKLREISDIARRQVEILNAQQQSRDKEVESLRMQLLDYQAQSDEKSLIAKLHQHNVSLQLSEATALGKLESITSKLQKMEAYNLRLEQKLDEKEQALYYARLEGRNRAKHLRQTIQSLRRQFSGALPLAQQEKFSKTMIQLQNDKLKI 1300          
The following BLAST results are available for this feature:
BLAST of TCONS_00054542-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CE2900.000e+037.10Centrosomal protein of 290 kDa OS=Homo sapiens GN=... [more]
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