TCONS_00054328-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054328-protein
Unique NameTCONS_00054328-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length697

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054328-protein ID=TCONS_00054328-protein|Name=TCONS_00054328-protein|organism=Clytia hemisphaerica|type=polypeptide|length=697bp
MDRGLGNYYRGNSGNARRDDRRYDDFYDRDRRGGSGNFRGGGGRNSRGGG
GRDRGFFGNQGNHGGGQNVIAALQLQQNQNLLSAYIRNNSRGGKNFQGAR
SSGYNNSGGFRPGDKRRQDQQPSGANKKSKNDTRRDNRRSSSTTKSGSQT
KKDSKKDEPKEDEIDIPDDQVEIPDHLMDNVEKLRQRADMERNVADEDID
KLVVFCYNGKGYDCLTCGFMLMKDHAFKNHLMSKSHVMNVIDARSDKKYQ
PTRDLLDIDIASDGWFEKSDIARKVIYKQAKVMMKAEMDLKKRELESFNR
DPSNFFSVNMASKKCATMTGDTVRITSIVESTIDVKEFSTDRFFGCEFVK
SVASFQCRLCDIKIHNASEVLPHIDSRVHRNKYQMHLRRQPDYEKKQKDQ
NKDLGLILQEHEGQAVLLSETNTKSETEDDEDNQGKTLLEEIDTILVRVP
EILNPPVKEDPKEKEPEKETETKKVDEPEKKEEETTTDKPVENEKKTEDT
TTEPVASTSAETEVKEETPDEPMETEQVKEETTTESTPPEVKEEAPEETE
AETSASQDEPPIAEDPAETAAESTDKPAAEEATEKVEAEKTEDEKPEIKT
PAPTSAKKTTKKAAASTRGRGTARRGTPKRLRGGKAAGSPKTRGKPAVEQ
VETPTAESPAKETPTVEEKPSDEKTDAIAADGSFMDGFQVVDEVQEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034258XLOC_034258Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054328TCONS_00054328Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.155.10coord: 206..620
e-value: 2.2E-6
score: 27.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..697
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 214..236
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 357..379

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054328-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top