TCONS_00053709-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053709-protein
Unique Name	TCONS_00053709-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	804

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053709-protein ID=TCONS_00053709-protein|Name=TCONS_00053709-protein|organism=Clytia hemisphaerica|type=polypeptide|length=804bp
MAATRKGAKGKQPEKSQKSKARKRNFDQEDRDEKASAAPQEKKQNFLDEC
KEEFKTTIEEKFGLLFPDDFFWFYSFIKNQADGFLEDLELQLTGPYHMLN
GNIKKDTDLSSTKLNLHGRYFVDTPEVNTVLYSTQDSDDLHIAYYRDSPT
ELPSLMVCCKNNQSGELNQYGDNIFGAISLYIKEKLKRTKDKSKTQKLKT
HLEAIEKQAEKHGLSLEANPPSLKKRAKLTVTKSFNKVGLVVPLDDSGVG
YREIRHSDKELKKVLTRIVDATNNDDEDTRNKYLDELQETITFIQFANDE
CDYGMGLEFEMYRFIKSILWYLLYGRSVDGHRRSTSLNRNMKLSRRFLVN
CVRMSEDEEARQPLVGNQESEGGGGDTYESAGTTQESGADAAIEEGEHDE
PPPEDLTTVCETFWNICNTIQGLPILAIPYTFKSGGWYSLITLLIVALAS
NYTSNILVKSLYEVRDGVKVRVRNSYLDIGEAFWKSGGKMLVLIIMVIEL
VFVSTMYPILVGAMFSKSFPDAPIPVWAWTLIGGIALLPNTLLKNLSQVA
WTSIITVISAFVIFISIVAYSFTRYDEWDIEYMNNFHASEFPAALGILVA
CYLAQPFVPFIESTMKKPEKFAPTMNYSFLAMTTLNIIVGFLADVTFYPD
TDEVVTNNLPEGILRQLINAMAAILAFTSYTLPMFTSFDILEKSNLPCLP
IGFGDKIYTCRVQTLRLFLVLITILMGAFIPRFTYLLAVVGSITGITLEF
VFPALFHMKIYCTHLKWYEFVMDMFLVFFGTLVMTISLIVSWISMYSCFV
YNEC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033873	XLOC_033873	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053709	TCONS_00053709	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM
IPR019361	HPF1

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 407..791 e-value: 2.9E-62 score: 210.6
IPR019361	Histone PARylation factor 1	PFAM	PF10228	DUF2228	coord: 90..316 e-value: 6.2E-63 score: 212.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..404

Blast

[Close]

BLAST of TCONS_00053709-protein vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 2.118e-65
Identity = 142/414 (34.30%), Postives = 220/414 (53.14%), Query Frame = 0

Query:  357 DEEARQPLVGNQESEGGGGDTYESAGTTQESGADAAIEEGEHDEPPPEDLTTVCETFWNICNTIQGLPILAIPYTFKSGGWYSLITLLIVALASNYTSNILVKSLYEV-RDGVKVRVRNSYLDIGEA-----FWKSGGKMLVLIIMVIELVFVSTMYPILVGAMFSKSFPDAPIPVWAWTLIGGIALLPNTLLKNLSQVAWTSIITVISAFVIFISIVAYSFTRYDEWDIEYMNNF-HASEFPAALGILVACYLAQPFVPFIESTMKKPEKFAPTMNYSFLAMTTLNIIVGFLADVTFYPDTDEVVTNNLPEGILRQLINAMAAILAFTSYTLPMFTSFDILEKS-----NLPCLPIGF-GDKIYTCRVQTLRLFLVLITILMGAFIPRFTYLLAVVGSITGITLEFVFPALFH 757
            DE A  P+ G+   + G G     +G+  +       E G HD+P      T  E  WN+ N IQG+ +L +PY    GG+  L  ++  A+   YT  IL+  LYE   DG  VRVR+SY+ I  A     F   GG++ V +  +IELV    +Y ++ G +   SFP  P+   +W++I    LLP   LKNL  V+  S++  ++ FVI I ++AY  +R  +W  E +  +    +FP ++GI+V  Y +Q F+P +E  M++P +F   MN++ +A   L  +   +A +T+  +T EV+T+NLP G +R ++N      A  SY LP F + ++LEKS     +    P  + GD        TLR  LV+ T+LM  ++P F  L+ + GS+TG  L F+ P+LFH
Sbjct:   72 DEGAEAPVEGDIHYQRGSGAPLPPSGSKDQ--VGGGGEFGGHDKPK----ITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLGGRV-VNVAQIIELVMTCILYVVVSGNLMYNSFPGLPVSQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLP-GSIRAVVNIFLVAKALLSYPLPFFAAVEVLEKSLFQEGSRAFFPACYSGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFH 477

The following BLAST results are available for this feature:

BLAST of TCONS_00053709-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053709-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VIAAT	2.118e-65	34.30	Vesicular inhibitory amino acid transporter OS=Hom...	[more]

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TCONS_00053709-protein (polypeptide) - C. hemisphaerica