TCONS_00053267-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053267-protein
Unique NameTCONS_00053267-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length682

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053267-protein ID=TCONS_00053267-protein|Name=TCONS_00053267-protein|organism=Clytia hemisphaerica|type=polypeptide|length=682bp
MNRFLFSSASILRREVLIAQRGIVTCVNYNNTGGYNSTTKQISKNYNGHG
LGRTPLYIGLRHHSGVTVDSDKMDKELDTVKVLNTLGSQVWPAGKPAIKA
RVVTALSLLIGSKLLNVQVPFLFKYAVDYLNSNPVAIGDVETAMVSTATI
LILGYGAARAGASLCNEMRNAVFARVAQNSVREMAQQTFLHLHSLDLSYH
LSRKTGMLSKAVDRGTRGISFFLNAMVFNIVPTIFEVSLVSGILAYNCGL
PFTITALTCLAAYSTFTLSITQWRTKFRVQMNRADNEAGSTAIDSLINYE
TVKYFNNEKYEAERYGKLLHQYQEASLKTTTSLAFLNFGQNFIFSSALTV
MMLLASQSIMQGTMTVGDLVMVNGLLFQLSIPLNFLGSVYRDLRQSLIDM
QSMFQLMDEKSKIKEIPDAPPLMLTSDKQQDIVFENVAFQYEGGAPIFND
LSMTIQAGKKTAIVGGSGSGKSTIVRMLYRFMEPNSGTIRIGDQVISDVT
LSSLRKNISIIPQDQVLFHDTIFYNINYGDLNASAEDVFAAARTADVHDS
IMRMPDGYDTRVGERGLKLSGGEKQRVAIARAILKDSSIILYDEATSSLD
SITEMNILKSLREITKNKTSLFIAHRLSTVVDADEIIVLGNGGVAERGTH
QQLLQNPDSYYGYLWEKQNETKIAEEQISEGG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033629XLOC_033629Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053267TCONS_00053267Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 457..643
e-value: 1.0E-13
score: 61.5
NoneNo IPR availableGENE3D3.40.50.300coord: 423..674
e-value: 5.2E-72
score: 241.8
NoneNo IPR availableGENE3D1.20.1560.10coord: 71..416
e-value: 5.3E-51
score: 172.8
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 105..381
e-value: 8.6E-36
score: 123.9
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 103..395
score: 39.815
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 90..417
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 449..597
e-value: 1.5E-32
score: 112.9
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 432..666
score: 23.476
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 569..583
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 424..664

Blast
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BLAST of TCONS_00053267-protein vs. Swiss-Prot (Human)
Match: ABCB7 (ATP-binding cassette sub-family B member 7, mitochondrial OS=Homo sapiens GN=ABCB7 PE=1 SV=2)

HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0
Identity = 356/612 (58.17%), Postives = 473/612 (77.29%), Query Frame = 0 
Query:   63 HSGVTVDSDKMD--KELDTVKVLNTLGSQVWPAGKPAIKARVVTALSLLIGSKLLNVQVPFLFKYAVDYLN---SNPVAIGDVETAMVSTATILILGYGAARAGASLCNEMRNAVFARVAQNSVREMAQQTFLHLHSLDLSYHLSRKTGMLSKAVDRGTRGISFFLNAMVFNIVPTIFEVSLVSGILAYNCGLPFTITALTCLAAYSTFTLSITQWRTKFRVQMNRADNEAGSTAIDSLINYETVKYFNNEKYEAERYGKLLHQYQEASLKTTTSLAFLNFGQNFIFSSALTVMMLLASQSIMQGTMTVGDLVMVNGLLFQLSIPLNFLGSVYRDLRQSLIDMQSMFQLMDEKSKIKEIPDAPPLMLTSDKQQDIVFENVAFQYEGGAPIFNDLSMTIQAGKKTAIVGGSGSGKSTIVRMLYRFMEPNSGTIRIGDQVISDVTLSSLRKNISIIPQDQVLFHDTIFYNINYGDLNASAEDVFAAARTADVHDSIMRMPDGYDTRVGERGLKLSGGEKQRVAIARAILKDSSIILYDEATSSLDSITEMNILKSLREITKNKTSLFIAHRLSTVVDADEIIVLGNGGVAERGTHQQLLQNPDSYYGYLWEKQN 669
            H+G  + +D  +  K++DT K++  + S VWP  +P ++ARV  +L  L G+K +N+ VPF+FKYAVD LN    N + + D    + + AT +++GYG +RAGA+  NE+RNAVF +VAQNS+R +A+  FLHLH+LDL +HLSR+TG LSKA+DRGTRGISF L+A+VFN++P +FEV LVSG+L Y CG  F +  L  L  Y+ FT+++T+WRT+FR++MN+ADN+AG+ AIDSL+NYETVKYFNNE+YEA+RY   L  Y+ ASLK+T++LA LNFGQ+ IFS  LT +M+LASQ I+ GT+TVGDLVMVNGLLFQLS+PLNFLG+VYR+ RQ+LIDM ++F L+   ++IK+   A PL +T  +   + F+NV F+Y  G  + + +S  + AGKK AIVGGSGSGKSTIVR+L+RF EP  G+I +  Q I DV+L SLR+ + ++PQD VLFH+TI+YN+ YG+++AS E+V+A A+ A +HD+I+RMP GYDT+VGERGLKLSGGEKQRVAIARAILKD  +ILYDEATSSLDSITE  IL +++++ K++TS+FIAHRLSTVVDADEIIVL  G VAERGTH  LL NP S Y  +W  Q+
Sbjct:   99 HAGGGLHTDPKEGLKDVDTRKIIKAMLSYVWPKDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGNMLNLSDAPNTVATMATAVLIGYGVSRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLHLHNLDLGFHLSRQTGALSKAIDRGTRGISFVLSALVFNLLPIMFEVMLVSGVLYYKCGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAAIDSLLNYETVKYFNNERYEAQRYDGFLKTYETASLKSTSTLAMLNFGQSAIFSVGLTAIMVLASQGIVAGTLTVGDLVMVNGLLFQLSLPLNFLGTVYRETRQALIDMNTLFTLLKVDTQIKDKVMASPLQITP-QTATVAFDNVHFEYIEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYGNISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLLANPHSIYSEMWHTQS 709
The following BLAST results are available for this feature:
BLAST of TCONS_00053267-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCB70.000e+058.17ATP-binding cassette sub-family B member 7, mitoch... [more]
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