TCONS_00053169-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053169-protein
Unique NameTCONS_00053169-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length481

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053169-protein ID=TCONS_00053169-protein|Name=TCONS_00053169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
MELVTIIHNNRPLQLPRLFLRADDLAACFAVDREGLHLKCITNNGEIKNF
IPLSDGKFELDPTINKYNLVAVNNDTHRLINNDSSSSSRTPNVRYGHGSM
NNENNEMRTPTIAYGRRGNAGLRAVPGFKRKSNSSPVLPVPLGRKKKEET
KSKKKISIWLSGIKKIEKDRNREFFHQEDLRNKEPVKFEPYPFYEVPVCL
EEISCKEQVNVRSIIGEIRRQIGGMDYVITDKKGNPIRDMPNTRGAENWV
GNKYIRAIDAIAYKKWRPATFELIKTDYEIYSSSSDSEFGDIPPPPSPSF
SDLHFLNIQSSTNSSSSSTSTTVTNSPSTNVIETSTTQVASSSTHVSSTA
MQNQSYVSNRDLLAEIERLEEINNRIESKIDQLPTLQPETLQPEVSQPEA
VVSKADVKELLTCPICTCCNFDIVYCHTCNQFAGCKDCIYRVDSCPLCRA
SFSITCDGCSNEINFRPKSITIPGLRDILEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033559XLOC_033559Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053169TCONS_00053169Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 359..379
NoneNo IPR availableGENE3D1.10.1170.10coord: 128..457
e-value: 1.3E-4
score: 21.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..149
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 413..449
score: 8.58

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053169-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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