TCONS_00052732-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052732-protein
Unique NameTCONS_00052732-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length354

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052732-protein ID=TCONS_00052732-protein|Name=TCONS_00052732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
MMYCILVGASLLLLNHLVLVKSGVLDCGGVYTSRFGDIQSPSFPNAISNN
LHCTWIINGTRRGDLVSLEFDAFSINDTESTDCSKTYIEISNYGSRGVRF
CDDKLPPGVLDSESNIVVITLVTSAKDHTYSKGFILKYVISQKIVTTTMT
VPKTIPTIPTCGGEVTAPFGHLNSPFFPEAQTNLNCIWNINAKNENDYIE
LAFNTIDINDDSKDCQNNYITFGDMIHENTLPRYCNRNKPTLNFISKTPS
VFIKLVTDNGTNASPGFDAVYKMYNGNGSIISTTPLSSTPQSGESTGAGG
SKNTGEKVAVGIIIGLLALILIVDLYNCRRQKGMIYYACTKQDKYKQKRL
YNEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033335XLOC_033335Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052732TCONS_00052732Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000859CUB domainSMARTSM00042CUB_2coord: 27..141
e-value: 1.5E-16
score: 71.0
coord: 161..274
e-value: 4.0E-15
score: 66.2
IPR000859CUB domainGENE3D2.60.120.290coord: 156..277
e-value: 1.1E-21
score: 76.7
IPR000859CUB domainPFAMPF00431CUBcoord: 161..271
e-value: 1.7E-15
score: 57.2
coord: 27..138
e-value: 7.9E-15
score: 55.0
IPR000859CUB domainGENE3D2.60.120.290coord: 24..144
e-value: 9.6E-22
score: 76.8
IPR000859CUB domainPROSITEPS01180CUBcoord: 161..274
score: 20.441
IPR000859CUB domainPROSITEPS01180CUBcoord: 27..141
score: 20.455
IPR000859CUB domainCDDcd00041CUBcoord: 27..140
e-value: 3.05948E-18
score: 77.8378
IPR000859CUB domainCDDcd00041CUBcoord: 161..271
e-value: 2.53901E-16
score: 72.8302
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 26..139
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 158..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..302

Blast
[Close]
BLAST of TCONS_00052732-protein vs. Swiss-Prot (Human)
Match: CUBN (Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=5)

HSP 1 Score: 90.8929 bits (224), Expect = 8.490e-20
Identity = 83/323 (25.70%), Postives = 147/323 (45.51%), Query Frame = 0 
Query:   27 CGG-VYTSRFGDIQSPSFPNAISNNLHCTWIINGTRRGDLVSLEFDAFSINDTESTDCSKTYIEISNYGSRGV----RFCDDKLPPGVLDSESNIVVITLVTSAKDHTYSKGFILKYV----ISQKIVTTTMTVPKTIPTIPTCGGEVTAPFGHLNSPFFPEA-QTNLNCIWNINAKNENDYIELAFNTIDINDDSKDCQNNYITFGDMIHENTL-PRYCNRNKPTLNFISKT-PSVFIKLVTDNGTNASPGFDAVYKMYNGNGSIISTTPLSSTPQSGESTGAGGSKNTGEKV-AVGIIIGLLALILIVDLYNCRRQKGMIY 336
            CGG + TS F  + SP FP    NN +C+WII      + ++L F  F +    ST C++ ++EI + G        R+C   +P  +                   ++S    L++V    IS     TT+T      ++  CGG      G  NSP +P+    N+ C+WNI   +  + ++L+F +  + +DS+DC  +++   +      L  RYC  + P LN+ S    +++++ ++D G+ +  GF A +    GN +I+ T    ++P   E+     +      V A  ++ G +  + I ++ NC   K  IY
Sbjct: 1620 CGGHILTSSFDTVSSPRFPANYPNNQNCSWIIQAQPPLNHITLSFTHFELE--RSTTCARDFVEILDGGHEDAPLRGRYCGTDMPHPIT------------------SFSSALTLRFVSDSSISAGGFHTTVTA-----SVSACGGTFYMAEGIFNSPGYPDIYPPNVECVWNI-VSSPGNRLQLSFISFQL-EDSQDCSRDFVEIREGNATGHLVGRYCGNSFP-LNYSSIVGHTLWVRFISD-GSGSGTGFQATFMKIFGNDNIVGTHGKVASPFWPENYPHNSNYQWTVNVNASHVVHGRILEMDIEEIQNCYYDKLRIY 1913
The following BLAST results are available for this feature:
BLAST of TCONS_00052732-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CUBN8.490e-2025.70Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=5[more]
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