TCONS_00052653-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052653-protein
Unique NameTCONS_00052653-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1352

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052653-protein ID=TCONS_00052653-protein|Name=TCONS_00052653-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1352bp
MMACLTSKLKLVLLVLLSFAFQDIFGHNLETELQCAFYPSQFGAVGSTLD
KRLCGTGFGGFKVLPSNSEIPNLWDSSIDTGLSSGPNKFSKDITAYPDLG
YLRYNADANSGSPFIQTAFISPILDVSTLSTFDINFLYVVNGAAVGQLVL
VLEYDPSRFDQITPINITSLKNDPGQRIERNVGGSNGDPAWKEFKATFDV
ASTESCQIFLQVIQEVPSDRDNGNIAIDGLDIKPGATEPATTQPATTQAP
TTQPATTQPPTTIAPTTQPPTTQAPTTQPPTTQPPTTQPATTQPATTQAP
TTQPPTTQPTTTQSTTTQPATTQAPTTQPPTTQPATTQPATTQPPSTQPA
TTQPATTQPPVPSGPIGELTEWTQWTECSVTCGEGMRHRNRTCENGTMCA
GLLQDSEPCLASLFTCDLGTWTEWSAWTQCSGTCGSRTRMSTRECPNHGI
PPCEGTNSTIVQNCTDTECVLPSCQGYENMYSCSFDGTFEKELSEFCNLD
KWLFNGWAEASSTPSANTGPSVDATFNKNCGKFLYYEATDAKTGSALSAP
FMSTSGEMCLCFSLSAYSKNVDAMGSMSLALIGDDHKIIKVIWDSEGFMT
MNDTHWDKIHLNLPPLNTTMSYKLMFIGQRNDDNVYSFESDIAIDNINLN
EGNCSGPIDGRYTEWSSWGMCDQACGMGKQNRTRYCTNPAPMNGGSWCMG
EHMQNQTCKIKDCDRNGEWSAWTEWGPCDKSCGGGNKTRYRECHNPPPMG
NGLQCLLNGSSTERSMIDMDVQTCNDIICDRDGGWNAWAVAVECSVECGN
GTKVSLRNCTNPVPLGGGKQCPMEKKLYNLTMYALQDRREEPCYAGECLT
VTTGWSIWSDWGECSAPCDDGVTELKQTRNRTCIQEPCPGNATQSYLCNL
HIKCPVNGSWSEWQPLTSCSVSCGNGTKRFQRLCNNPAPANGGLDCPGDA
MKTENCTNLPCPGNWTTWSSWECSSQCPNGTQYRSRGCTNPVPEVGADLC
LMLNTSRSTFESECGGPGCCATNGTWVDVKNITSCSAECGVGNWTWEQVC
TNFGCNGTDVFCEGGEEPGAVRNYTTECKTWLDKERESCRLHGGWKVVNE
TECSCTSNQTKVVTRECIDPVPQGGGNWCENIDGTGNNDTEIFTKSCVSE
CHINGSWSGWVNTTICTSCGISDTTGVLNRTRYCNNPSALGNGTNCTDTE
RNVINQYYDYMYNVHCDDSSCPIPGNWSIWYNSSCDASCDTGYLTMERFC
NDSAPVNDGDKCTNENGDRVLYESKSVTCNTHPCPQSGNWTEWTAWTVCD
GTCGKDKNKTRSRECTNPPPENGGGACLKLKGGLGLNDTDSVSCGLPCCQ
RK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033270XLOC_033270Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052653TCONS_00052653Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000998MAM_dom
IPR000884TSP1_rpt
IPR013320ConA-like_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000998MAM domainSMARTSM00137MAM_2coord: 478..656
e-value: 3.6E-4
score: -2.4
IPR000998MAM domainPROSITEPS50060MAM_2coord: 481..656
score: 19.85
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 785..849
e-value: 0.0021
score: 27.3
coord: 369..417
e-value: 1.2E-8
score: 44.7
coord: 910..962
e-value: 4.9E-10
score: 49.3
coord: 1095..1152
e-value: 9.8
score: 0.5
coord: 1224..1285
e-value: 0.042
score: 21.5
coord: 855..905
e-value: 3.7E-9
score: 46.4
coord: 965..1015
e-value: 0.052
score: 20.7
coord: 719..780
e-value: 1.0E-13
score: 61.6
coord: 421..470
e-value: 2.2E-6
score: 37.2
coord: 1290..1350
e-value: 1.8E-7
score: 40.8
coord: 1157..1222
e-value: 5.1
score: 3.0
coord: 662..714
e-value: 8.5E-11
score: 51.9
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 371..409
e-value: 1.4E-10
score: 41.1
coord: 911..961
e-value: 5.7E-10
score: 39.2
coord: 1292..1327
e-value: 9.1E-4
score: 19.3
coord: 423..469
e-value: 1.1E-4
score: 22.2
coord: 964..994
e-value: 0.014
score: 15.5
coord: 664..713
e-value: 1.1E-7
score: 31.9
coord: 720..761
e-value: 2.2E-8
score: 34.1
coord: 786..825
e-value: 0.0021
score: 18.1
coord: 856..900
e-value: 9.0E-5
score: 22.5
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 1223..1284
e-value: 2.3E-6
score: 27.3
coord: 781..848
e-value: 1.4E-8
score: 34.4
coord: 417..469
e-value: 2.1E-7
score: 30.7
coord: 1286..1349
e-value: 6.0E-8
score: 32.4
coord: 658..713
e-value: 1.9E-13
score: 50.0
coord: 962..1019
e-value: 1.1E-5
score: 25.2
coord: 906..961
e-value: 1.6E-14
score: 53.4
coord: 366..416
e-value: 1.8E-10
score: 40.4
coord: 715..779
e-value: 8.4E-13
score: 47.9
coord: 1153..1221
e-value: 0.0019
score: 18.0
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 849..905
e-value: 1.1E-7
score: 31.6
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 852..905
score: 10.996
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 366..417
score: 11.299
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 716..780
score: 11.641
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 907..962
score: 11.836
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 1287..1350
score: 9.795
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 782..849
score: 9.106
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 963..1285
score: 8.822
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 659..714
score: 11.793
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 418..470
score: 10.485
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 1221..1284
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 779..826
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 419..453
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 658..708
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 853..900
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 716..757
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 960..1002
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 369..409
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 1288..1328
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 904..961
NoneNo IPR availableGENE3D2.60.120.200coord: 71..238
e-value: 0.0011
score: 18.4
coord: 478..656
e-value: 1.7E-16
score: 60.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..370
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 482..654

Blast
BLAST of TCONS_00052653-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 3.457e-56
Identity = 127/326 (38.96%), Postives = 165/326 (50.61%), Query Frame = 0
Query:  648 NLNEGNCSG---PIDGRYTEWSSWGMCDQACGMGKQNRTRYCTNPAPMNGGSWCMGEHMQNQTCKIKDCDRNGEWSAWTEWGPCDKSCGGGNKTRYRECHNPPPMGNGLQCLLNGSSTERSMIDMDVQTCNDIICDRDGGWNAWAVAVECSVECGNGTKVSLRNCTNPVPLGGGKQCPMEKKLYNLTMYALQDRREEPCYAGECLTVTTGWSIWSDWGECSAPCDDGVTELKQTRNRTCIQEP-------CPGNATQSYLCNLHIKCPVNGSWSEWQPLTSCSVSCGNGTKRFQRLCNNPAPANGGLDCPGDAMKTENCTNLPCPG 963
            +L   NC     P+DG ++EWS W  C ++CG G Q RTR C NP+  +GG  C G  ++   C I+ C  +G WSAW  WG C +SCG G +TR R C+NPPP   G  C  +G+ T+       +Q CN+  C   G W  WA    CSV CG G +   R C++PVP  GG++C               D + + C +  C T    WS WS WG CS  C+ G    +  R RTC   P       C G  +Q   CN  + CPV+GSW  W   + CS SCG G K  +RLC++P P  GG  CPGD  +   C    CPG
Sbjct: 4572 DLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYC--DGAETQ-------MQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGS------------DVQSDFCNSDPCPT-HGNWSPWSGWGTCSRTCNGG----QMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDM-CPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACPG 4870          

HSP 2 Score: 202.986 bits (515), Expect = 2.995e-52
Identity = 126/354 (35.59%), Postives = 168/354 (47.46%), Query Frame = 0
Query:  658 IDGRYTEWSSWGMCDQACGMGKQNRTRYCTNPAPMNGGSWCMGEHMQNQTCKIKDCDRNGEWSAWTEWGPCDKSCGGGNKTRYRECHNPPPMGNGLQCLLNGSSTERSMIDMDVQTCNDIICDRDGGWNAWAVAVECSVECGNGTKVSLRNCTNPVPLGGGKQCPMEKKLYNLTMYALQDRREEPCYAGECLTVTTGWSIWSDWGECSAPCDDGVTELKQTRNRTCIQEPCP--------GNATQSYLCNLHIKCPVNGSWSEWQPLTSCSVSCGNGTKRFQRLCNNPAPANGGLDCPGDAMKTENCTNLPCP--GNWTTWSSW-ECSSQCPNGTQYRSRGCTNPVPEVGADLC 1000
            + G +++WS+W  C   CG G Q R+R C  P P NGG  C G  ++ + C+ K C  +G WS W+ W  C +SCG GN+TR R C+NP     G  C   G++ E  M       CN   C   G W+AW     CS  CG GT+   R C NP P  GG  C   +     T   + + R  P +          W+ W+ W  CS  C  G  +    R R C  +P P        G+  QS  CN    CP +G+WS W    +CS +C  G  R  R C+NP P+NGG  C G   + + C    CP  G+W +W SW +CS+ C  G + R R C +PVP  G   C
Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPC--EGNAVEIIM-------CNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAE-----TQMQVCNERNCPIHG--------KWATWASWSACSVSCGGGARQ----RTRGC-SDPVPQYGGRKCEGSDVQSDFCNSD-PCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPC 4853          

HSP 3 Score: 167.933 bits (424), Expect = 1.551e-41
Identity = 148/444 (33.33%), Postives = 195/444 (43.92%), Query Frame = 0
Query:  777 IICDRDGGWNAWAVAVECSVECGNGTKVSLRNCTNPVPLGGGKQCPMEKKLYNLTMYALQDRREEPCYAGECLTVTTGWSIWSDWGECSAPCDDGVTELKQTRNRTC----IQE---PCPGNATQSYLCNLHIKCPVNGSWSEWQPLTSCSVSCGNGTKRFQRLCNNPAPANGGLDCPGDAMKTENCTNLPCP--GNWTTWSSWE-CSSQCPNGTQYRSRGCTNPVPEVGADLCLMLNTSRSTFESECGGPGCCATNGTWVDVKNITSCSAECGVGNWTWEQVCTNFGCNGTDVFCEGGEEPGAVRNYTTECKTWLDKERESCRLHGGWKVVNE-TECSCT-SNQTKVVTRECIDPVPQGGGNWCENIDGTGNNDTEIFTKSCVSEC-----HINGSWSG----------WVNTTICTSCGISDTTGVLNRTRYCNNPSALGNG 1193
            +I    GG++ W+    CSV CG G +   R C  P+P  GGK C    +  +L M   Q++   PC       V   WS WS W EC+  C  G     QTR RTC    +Q    PC GNA +  +CN+   CPV+G+WS WQP  +CS SCG GT+   RLCNNP PA GG  C G   + + C    CP  G W TW+SW  CS  C  G + R+RGC++PVP+ G   C       S  +S+      C T+G W       +CS  C  G     + C N   +       GG   G   +    C T      + C + G W   +  ++CS +     K   R C  PVP  GG  C         DT   T+  V  C        GS  G          ++N TI  S   SDT  +  R +  N P +LG+ 
Sbjct: 4524 VIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPC----QGSDLEMRNCQNK---PC------PVDGSWSEWSLWEECTRSCGRG----NQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIR-PCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKC-----EGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPS------NGGRACGGPDSQIQRCNT------DMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCP-------GDTTQVTRCNVQACPGGPQRARGSVIGNINDVEFGIAFLNATITDSPN-SDTRII--RAKITNVPRSLGSA 4922          

HSP 4 Score: 159.844 bits (403), Expect = 4.289e-39
Identity = 128/407 (31.45%), Postives = 180/407 (44.23%), Query Frame = 0
Query:  891 NATQSYLCNLHIKCPVNGSWSEWQPLTSCSVSCGNGTKRFQRLCNNPAPANGGLDCPGDAMKTENCTNLPCP--GNWTTWSSW-ECSSQCPNGTQYRSRGCTNPVPEVGADLCLMLNTSRSTFESECGGPGCCATNGTWVDVKNITSCSAECGVGNWTWEQVCTN----FGCNGTDVFCEGGEEPGAVRNYTTECKTWLDKERESCRLHGGWKV-VNETECSCT-SNQTKVVTRECIDPVPQGGGNWCENIDGTGNNDTEIFTKSCVSE-CHINGSWSGWVNTTICT-SCGISDTTGVLNRTRYCNNPSALGNGTNCTDTERNVINQYYDYMYNVHCDDSSCPIPGNWSIWYN-SSCDASCDTGYLTMERFCNDSAPVNDGDKCTNENGDRVLYESKSVTCNTHPCP 1285
            N   S L  + +   V+G +S+W    +CSV+CG G ++  RLCN P PANGG  C G  ++  NC N PCP  G+W+ WS W EC+  C  G Q R+R C NP  + G   C       +  E        C  +G W   +   +CS  CG G  T  ++C N    FG +    +C+G E    V N           ER +C +HG W    + + CS +     +  TR C DPVPQ GG  CE  D        + +  C S+ C  +G+WS W     C+ +C      G + R R C+NP     G  C   +  +            C+   CP+ G+W  W++ S C ASC  G  T +R C+   PV  G  C  +        ++   CN   CP
Sbjct: 4513 NLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPC-----EGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGS----YCDGAETQMQVCN-----------ER-NCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSD--------VQSDFCNSDPCPTHGNWSPWSGWGTCSRTC----NGGQMRRYRTCDNPPPSNGGRACGGPDSQI----------QRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDT-------TQVTRCNVQACP 4869          

HSP 5 Score: 120.939 bits (302), Expect = 2.931e-27
Identity = 110/373 (29.49%), Postives = 153/373 (41.02%), Query Frame = 0
Query:  963 GNWTTWSSWE-CSSQCPNGTQYRSRGCTNPVPEVGADLCLMLNTSRSTFESECGGPGCCATNGTWVDVKNITSCSAECGVGNWTWEQVCTNFGCNGTDVFCEGGEEPGAVRNYTTECKTWLDKERESCRLHGGWKVVNE----TECSCTSNQTKVVTRECIDPVPQGGGNWCENIDGTGNNDTEIFTKSCVSE-CHINGSWSGWVNTTICT-SCGISDTTGVLNRTRYCNNPSALGNGTNCTDTERNVINQYYDYMYNVHCDDSSCPIPGNWSIWYN-SSCDASCDTGYLTMERFCNDSAPVNDGDKCTNENGDRVLYESKSVTCNTHPCPQSGNWTEWTAWTVCDGTCGKDKNKTRSRECTNPPPENGGGAC 1327
            G ++ WS+W  CS  C  G Q RSR C  P+P  G   C       S  E        C  +G+W +      C+  CG GN T  + C N         CEG     AV       +         C +HG W         +E      QT+   R C +P P  GG++C   DG      E   + C    C I+G W+ W + + C+ SCG     G   RTR C++P     G  C  ++          + +  C+   CP  GNWS W    +C  +C+ G +   R C++  P N G  C          +S+   CNT  CP  G+W  W +W+ C  +CG  + KTR R C +P P  GG  C
Sbjct: 4530 GGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPC-----QGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGN----AVEIIMCNIR--------PCPVHGAWSAWQPWGTCSESCGKGTQTR--ARLCNNPPPAFGGSYC---DGA-----ETQMQVCNERNCPIHGKWATWASWSACSVSCG----GGARQRTRGCSDPVPQYGGRKCEGSD----------VQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGP-------DSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGE-KTRKRLCDHPVPVKGGRPC 4853          
The following BLAST results are available for this feature:
BLAST of TCONS_00052653-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN13.457e-5638.96Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
back to top