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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00052511-protein ID=TCONS_00052511-protein|Name=TCONS_00052511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=931bp
MALVNCSTIDVQTKEGVGSINLCIGSITKCEDVVDVLVISAYPGDYTPVH
GTVIGALQNDLGIRVRELAKKKEEDQRKLLSCWWSNELPKKSKFKRIMCF
EGSFKKNAQPPSTVSEVFRSLVSLSKEEPISVMMPLLSSGNQRYNQKLML
RLIVEASIHWMEIGLPMKELKIVLYQRDTSEVSKVNKILVDLFEEMRQKT
NKLAMKNKNEFKYDFYLTYAPGNDEVAAMVVKSIKEIQPNYKIHEERQKI
DPEKAFQDHIYETMSTCARVIVLLSPNFMDDVACIEKYNIGMCYARNTRR
NYLAPIYIEEISNMPTYMGLIQYIDARPVSEASIQNVLSTLCVDQKPTKD
VKTTQQQEHSPKQISLENAYDLFISYSHQNYDVALKVYHVIKEQKPHWRI
FFDQDELKAGHSWQSKLYHSIESSRIVIALISKTYLQSKVCQEEFNLAQS
LSMDHTLPHSLRLFRVRLEDFQELPLWCGSKKNMFDFTAKDPANLSKFVM
YMDHEFDNYLYLSERDILTIDNVTSKFRSEFARSKYPIIPDVDFTQECGM
QENLNSSQSGYDVILISHQDHITIVQSLKERLLCKAPSLKILLVTNKDEK
TIRLNVFDETRLVMSFLGKSFFEDVFLMEQFNTALYRHRFKEYIIACPVI
LGELPAMPVYPKLSFCLFSLTDKQWHNKDGKVSVERFVDNVASVVSNILF
LKPTTATSFKTLFNILELREWGDETYGDRKKLKPLAFDGAMVVSANDRSI
ISVRDSMLMVSGSHALSSPEPILEITSSGLEYSIPEPKEPEEKSPNLQQQ
AEKTETTSTDYVEQKPSDSPRSLLLIKKETTFKNGQAPPRSEVATISTEY
DRQKVLDSNESCSLPITKTPPPKREAEEPELLEQAPPTDVNSGEIPSSEL
NQTNEADPPNNKANDSRLKLKRQNSKTCCIH Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000157 | TIR_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007165 |
signal transduction |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | SMART | SM00255 | till_3 | coord: 369..505
e-value: 0.0012
score: 19.4
coord: 212..344
e-value: 0.014
score: 7.2 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | GENE3D | 3.40.50.10140 | | coord: 551..699
e-value: 0.23
score: 10.7
coord: 361..535
e-value: 1.3E-19
score: 69.9 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | PFAM | PF13676 | TIR_2 | coord: 373..478
e-value: 8.1E-15
score: 54.9 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | GENE3D | 3.40.50.10140 | | coord: 212..359
e-value: 3.0E-11
score: 43.1 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | PFAM | PF01582 | TIR | coord: 212..309
e-value: 3.2E-7
score: 30.2 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | PROSITE | PS50104 | TIR | coord: 368..448
score: 13.73 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | PROSITE | PS50104 | TIR | coord: 211..313
score: 10.345 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | SUPERFAMILY | 52200 | Toll/Interleukin receptor TIR domain | coord: 369..471 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | SUPERFAMILY | 52200 | Toll/Interleukin receptor TIR domain | coord: 209..318 |
| None | No IPR available | GENE3D | 3.40.220.10 | | coord: 9..192
e-value: 2.6E-7
score: 29.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 782..823 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 854..931 |
| None | No IPR available | SUPERFAMILY | 52949 | Macro domain-like | coord: 20..181 |
Blast
The following BLAST results are available for this feature:
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