TCONS_00052270-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052270-protein
Unique NameTCONS_00052270-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length548

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052270-protein ID=TCONS_00052270-protein|Name=TCONS_00052270-protein|organism=Clytia hemisphaerica|type=polypeptide|length=548bp
TFNRAIKSLYIMALKSQFISNRFSLVVFFLLVNKQCQTLGSRYYNNGVTT
DYDNNDGDETFVEEPNQFSPSASLLDSNTWYQLMYQSLKIDRGSKFLGCR
LQNRYIKYFNNSVDQEQYCGYIPACKKPIIVRYTETKPLIYSEMKGTEKI
MKGLLIDILEEVLVQRCCLGCTNLQFVHYTIPDDMFFENFNAWENDSIIA
PVEFRGEESSLLGHHLVPLFQHRKVYFLGLHTEIDSYVLLRGVINNALLT
WPLFVTALSMAVLAGVIIWISEQWSNEEHFQKEFPRGAFEGFWWAYVSMT
TVGYGDKTPSTVFGRLFAILWILIGITLFNMFTAAIITGLNAAIRQHSTF
ELSGSKVGFIESKPHVYNSIMKEFAFPKVYFNTTQLMEALDNDEVQAIAL
DEYAYFHALPAFKNHGKIEIKHIAKLFDYHVGFGVMVKTNPYFQMQKEFN
EFSQEDLAFSQRLVQSRSSKQSTEEASTISIIFDAQKQPFWLTMVSTCVG
SMCMVLLWFLFRKCCELKNKSKVEASETREVEKSPGIKIEVGEKIHVR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033075XLOC_033075Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052270TCONS_00052270Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0032802pore_dom_K_chnl
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005267potassium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0071805potassium ion transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071805 potassium ion transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005267 potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003280Two pore domain potassium channelPRINTSPR013332POREKCHANELcoord: 429..438
score: 37.83
coord: 297..325
score: 40.59
NoneNo IPR availableGENE3D1.10.287.70coord: 246..480
e-value: 5.0E-23
score: 80.7
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 248..373
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 264..337
e-value: 5.8E-15
score: 54.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052270-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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