TCONS_00051836-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051836-protein
Unique NameTCONS_00051836-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length595

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051836-protein ID=TCONS_00051836-protein|Name=TCONS_00051836-protein|organism=Clytia hemisphaerica|type=polypeptide|length=595bp
METNHAESTDQHKRSAKIRKSVVKLFVQTSTPNYCMPWQMKRQQSCTGSG
FVISGRRILTNAHVTAYQKSIRVRKHGDAKKYNAHILHVAHACDIAMVGV
NDDSFWEDLEPLEMGGVPQLEEDVVVMGYPTGGDNISVTRGVVSRVDIQR
YSHSGTQLLAIQIDAAINSGNSGGPALKDGCVVGVAFETLNKAENIGYII
PIPVINHFLEDIQKHEHFTGFCNLGISWQPIESEHMRRYFQMETKQTGVL
VSKIVRLSCCYGQLKRGDVLMALDDVEIADDGTVPFRGSERILWHYLIHK
KFPSDRVRALVYRAGEKMEVGISVGLLSHLVPPHLYDTRPSYVVYCGLVF
VALSQPYMLHQYGKDWGHKAPIRLCDRILYGVQGTKEQEVVVLSQVLASE
LTAGYDSFSNLQLYRVNGVPILNLRHLCHLLDRFTAPYIPTKQANGEIPV
ETNGEITNGTLESKGEIITPDDVTMDPVTDPSPTSGNEYVSFNVIETKGA
ENVPNKCAAMENCDDLELTEEELLYSQYTNSMDNLYHRAGDDPLLLDCTN
FIHFELDKDKIAVFNIATAYTKNNEILKQYAITTPRSDNLPEQKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032811XLOC_032811Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051836TCONS_00051836Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001940Peptidase_S1C
IPR001478PDZ
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0005515 protein binding
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001940Peptidase S1CPRINTSPR00834PROTEASES2Ccoord: 157..174
score: 61.92
coord: 50..62
score: 16.89
coord: 78..98
score: 24.04
coord: 263..275
score: 32.65
NoneNo IPR availableGENE3D2.40.10.10coord: 121..222
e-value: 1.5E-21
score: 75.9
NoneNo IPR availableGENE3D2.30.42.10coord: 223..328
e-value: 2.0E-10
score: 40.1
NoneNo IPR availablePFAMPF13365Trypsin_2coord: 48..185
e-value: 9.4E-21
score: 75.2
NoneNo IPR availableGENE3D2.40.10.10coord: 6..120
e-value: 2.5E-17
score: 62.3
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 194..280
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 12..216

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051836-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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