TCONS_00051715-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051715-protein
Unique Name	TCONS_00051715-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	479

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051715-protein ID=TCONS_00051715-protein|Name=TCONS_00051715-protein|organism=Clytia hemisphaerica|type=polypeptide|length=479bp
MASKECTIKDTHASIKWLVKISIIYHTSLVVCSALVNILFEDFDSSTWTT
EGEAQASRSASITSLVVKFAINGLTKWDSVYFNHIAGNYGYEYEQMLAFA
PGFPYLVHWIQSCLEFIIGANNVNSKAVGIALNLIFNIIATVLIYKLTLK
ISNVKSKVKDRYAVVASLAFIFNPANIFMISNYSESMFVAVQFALLWLLE
NESFFLASLMVSISTLVRSNGLLNVVFLVYFYIKRIITKEQIFEKYQCKH
SLVECLKPSILYLLIKSFYKHLFIILVYTTLSLTPYLTWQYHVYKRFCEI
THVVRSHNTHWCTYTLPFSYSYIQSHYWNVGFLKYFTLSQIPNFLLAAPI
CTIIFSGVYQVYTQNKHSKTDVLPWLGLKEVRFHLKNEDVTMLPADRTFV
YMCHAFFLTVFGILNVHVQILTRMICSSTPFVYWSVAELVTNQTLDKSFK
RRVFCIVLGYFITYNILGLFLHTNFYPWT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032746	XLOC_032746	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051715	TCONS_00051715	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007315	PIG-V/Gpi18

Vocabulary: **Molecular Function**
Term	Definition
GO:0004584	dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006506	GPI anchor biosynthetic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006506	GPI anchor biosynthetic process
molecular_function	GO:0004584	dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007315	GPI mannosyltransferase 2	PFAM	PF04188	Mannosyl_trans2	coord: 19..479 e-value: 5.3E-66 score: 223.7

Blast

[Close]

BLAST of TCONS_00051715-protein vs. Swiss-Prot (Human)
Match: PIGV (GPI mannosyltransferase 2 OS=Homo sapiens GN=PIGV PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 3.514e-52
Identity = 158/529 (29.87%), Postives = 252/529 (47.64%), Query Frame = 0

Query:   13 ASIKWLVKISIIYHTSLVVCSALVNILFEDFDSSTWTTEGEAQASRSASITSLVVKFAINGLTKWDSVYFNHIAGNYGYEYEQMLAFAPGFPYLVHWIQSCLEFIIGANNVNS-KAVGIA-LNLIFNIIATVLIYKLTLKISNVKSKVKDRYAVVASLAFIFNPANIFMISNYSESMFVAVQFALLWLLENESFFLASLMVSISTLVRSNGLLNVVFLVYFYIKRIITKEQIFEKYQCKH--SLVECLKP-SILYLLIKSFYKHLFIILVYTTLSLTPYLTWQYHVYKRFC------------------EITHVVRSHNTHWCTYTLPFSYSYIQSHYWNVGFLKYFTLSQIPNFLLAAPICTIIFSGVYQVYTQNKHSKTDVLPW----LGLKEVRFH--LKNEDVTMLPADRTFVYMCHAFFLTVFGILNVHVQILTRMICSSTPFVYWSVAELVTNQ-TLDKSFK--------------------------------RRVFCIVLGYFITYNILGLFLHTNFYPWT 479
             S K +++ ++      ++  AL N +  D  +  ++    A     +     +V+  + GL+ WD+ +F  IA  +GY YE   AF PGFP  +      L  + G  ++ S   + +A LN +F ++A V ++ L   + +   +     +  A+L F  +PAN+F+ + YSE++F  + F+ +  LE    + + L+ + +T VRSNGL++V FL++                QC+   S +  L P   L+ L+ S +  +F      TL L P+  +QY+ Y +FC                  +   +   +   WC + +P  YSYIQ  YWNVGFLKY+ L Q+PNFLLAAP+  ++    +   T +        PW    LGL+  + +  L+  D+  L + + FVY+ HA  L +FG L +HVQ+LTR + SSTP +YW  A L+ +Q  L +S K                                  V   +LGYF+TY +LGL LH NF PWT
Sbjct:    6 PSRKEVLRFAVSCRILTLMLQALFNAIIPDHHAEAFSPPRLA----PSGFVDQLVEGLLGGLSHWDAEHFLFIA-EHGYLYEHNFAFFPGFPLALLVGTELLRPLRGLLSLRSCLLISVASLNFLFFMLAAVALHDLGCLVLHCPHQ-----SFYAALLFCLSPANVFLAAGYSEALFALLTFSAMGQLERGRVWTSVLLFAFATGVRSNGLVSVGFLMH---------------SQCQGFFSSLTMLNPLRQLFKLMASLFLSVF------TLGL-PFALFQYYAYTQFCLPGSARPIPEPLVQLAVDKGYRIAEGNEPPWCFWDVPLIYSYIQDVYWNVGFLKYYELKQVPNFLLAAPVAILVAWATWTYVTTH--------PWLCLTLGLQRSKNNKTLEKPDLGFL-SPQVFVYVVHAAVLLLFGGLCMHVQVLTRFLGSSTPIMYWFPAHLLQDQEPLLRSLKTVPWKPLAEDSPPGQKVPRNPIMGLLYHWKTCSPVTRYILGYFLTYWLLGLLLHCNFLPWT 493

The following BLAST results are available for this feature:

BLAST of TCONS_00051715-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051715-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PIGV	3.514e-52	29.87	GPI mannosyltransferase 2 OS=Homo sapiens GN=PIGV ...	[more]

You are here

TCONS_00051715-protein (polypeptide) - C. hemisphaerica