TCONS_00050543-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050543-protein
Unique NameTCONS_00050543-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length613

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050543-protein ID=TCONS_00050543-protein|Name=TCONS_00050543-protein|organism=Clytia hemisphaerica|type=polypeptide|length=613bp
MSTGKLLNAFKNIGRQIYPLKIIRANTICGCLVQKSRNLAVHRVRRSRDQ
ENFTNKDFLLPLFGGGLLAFINIANCFSDSKRNAEDLCKAASEDDLYVIK
RLVAKGVDVNSKHPLGWSAIHAAAFSGNSKAMKYLIEKGADVNVCDEYTS
PYKIASHKRMHVLDVVMLREECFDGLKRNADFSKFTPLHYASLRDDYETV
KLLLDAGADPTMKDGRGYVPYEYADQLKLLLKDKFNEFGVKKEEREAEER
RRFPIEQRFREAIVGQEGAINAVASAVRRRDNGWYDEEHPLVFLFLGSSG
IGKTELAKQLAKYLHKDLNKGFIRLDMSEYQEKHEVAKLIGAPPGYIGHD
QGGQLTKKLKQFPKAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGHGKTI
ECKDAIFVMTSNLASEDIANHAIQLRAMAKKITHDKMTNEIQDENITLGR
VFKERVVYPILKRHFQRDEFLGRISEFVYFLPFSRSELSQLVSKELNVWA
ERAKRKHSIELQWDNDVLDILADGYDVHYGARSIKHEVERKVVNQLAAAH
ERGLIKAKSVVQLSVDYPNITVPIDGGDELKPSIKMKLLGESKDDPQVIS
MSDGVDDERPIFF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032010XLOC_032010Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050543TCONS_00050543Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001270ClpA/B
IPR019489Clp_ATPase_C
IPR002110Ankyrin_rpt
IPR003593AAA+_ATPase
IPR020683Ankyrin_rpt-contain_dom
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001270ClpA/B familyPRINTSPR00300CLPPROTEASEAcoord: 339..357
score: 68.06
coord: 368..386
score: 65.21
coord: 293..311
score: 68.96
coord: 401..415
score: 40.0
IPR019489Clp ATPase, C-terminalSMARTSM01086ClpB_D2_small_2coord: 483..572
e-value: 3.9E-8
score: 43.0
IPR019489Clp ATPase, C-terminalPFAMPF10431ClpB_D2-smallcoord: 484..561
e-value: 6.2E-12
score: 45.3
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 183..212
e-value: 1.4E-5
score: 34.6
coord: 115..144
e-value: 2.1E-4
score: 30.6
coord: 82..111
e-value: 190.0
score: 10.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 183..215
score: 12.77
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 115..147
score: 13.063
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 289..433
e-value: 5.1E-11
score: 52.6
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 88..214
e-value: 2.0E-13
score: 50.6
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 77..254
e-value: 4.5E-31
score: 106.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 82..224
score: 25.223
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 84..144
coord: 180..227
IPR003959ATPase, AAA-type, corePFAMPF07724AAA_2coord: 292..476
e-value: 3.0E-42
score: 144.5
NoneNo IPR availableGENE3D1.10.8.60coord: 483..575
e-value: 1.2E-14
score: 53.8
NoneNo IPR availableGENE3D3.40.50.300coord: 255..482
e-value: 6.2E-42
score: 142.9
NoneNo IPR availableCDDcd00009AAAcoord: 264..418
e-value: 1.61139E-15
score: 73.3343
NoneNo IPR availableCDDcd00204ANKcoord: 87..231
e-value: 5.7754E-20
score: 85.513
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 255..561

Blast
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BLAST of TCONS_00050543-protein vs. Swiss-Prot (Human)
Match: CLPB (Caseinolytic peptidase B protein homolog OS=Homo sapiens GN=CLPB PE=1 SV=1)

HSP 1 Score: 572.392 bits (1474), Expect = 0.000e+0
Identity = 295/542 (54.43%), Postives = 391/542 (72.14%), Query Frame = 0 
Query:   63 FGGGLLAFINIANCFSDSKRNAED-LCKAASEDDLYVIKRLVAKGVDVNSKHPLGWSAIHAAAFSGNSKAMKYLIEKGADVNVCDEYTSPYKIASHKRMHVLD------------------------------VVMLREECFDG-LKRNADFSKFTPLHYASLRDDYETVKLLLDAGADPTMKDGRGYVPYEYADQLKL--LLKDKFNEFGVKKEEREAEERRRFPIEQRFREAIVGQEGAINAVASAVRRRDNGWYDEEHPLVFLFLGSSGIGKTELAKQLAKYLHKDLNKGFIRLDMSEYQEKHEVAKLIGAPPGYIGHDQGGQLTKKLKQFPKAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGHGKTIECKDAIFVMTSNLASEDIANHAIQLRAMAKKITHDKMTNEIQD----ENITLGRVFKERVVYPILKRHFQRDEFLGRISEFVYFLPFSRSELSQLVSKELNVWAERAKRKHSIELQWDNDVLDILADGYDVHYGARSIKHEVERKVVNQLAAAHERGLIKAKSVVQLSVD 566
             G   LA   + +C+S S  N +  L +AA  +++  + RL+++G DVN+KH LGW+A+  AA + N+  ++ L+  GAD N+ D+++S YK A  + +H L+                              V++ RE+ F+  L   A F   T LHYA L DDY TVK LLD GA+P  ++  G+ P +YA + ++  LL+    ++  K+ +REAEERRRFP+EQR +E I+GQE AI  V +A+RR++NGWYDEEHPLVFLFLGSSGIGKTELAKQ AKY+HKD  KGFIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTKKLKQ P AVVLFDEVDKAHPDVLT++LQLFDEGRLTDG GKTI+CKDAIF+MTSN+AS++IA HA+QLR  A +++ +++   + D    + IT+ + FKE V+ PILK HF+RDEFLGRI+E VYFLPF  SEL QLV+KELN WA+RAK++H+I L WD +V D+L DGY+VHYGARSIKHEVER+VVNQLAAA+E+ L+     ++++V+
Sbjct:  113 LGMCALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGADVNAKHRLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASRHITNQWTSALEFRRWLGLPAGVLITREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654
The following BLAST results are available for this feature:
BLAST of TCONS_00050543-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLPB0.000e+054.43Caseinolytic peptidase B protein homolog OS=Homo s... [more]
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