TCONS_00050447-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050447-protein
Unique NameTCONS_00050447-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050447-protein ID=TCONS_00050447-protein|Name=TCONS_00050447-protein|organism=Clytia hemisphaerica|type=polypeptide|length=159bp
FFRAMRVGYFSQHHVDALSLKQTSLEFFKKRFPGKLDVEYRSHLGKYGVT
GDLAMRPISSLSGGQKSRVAFALMTWHEPNFFILDEPTNHLDIETVEALG
KALQKFNGGVILVSHNEQLIQMIAQETWLCGEKTVKRIDGGFQAYKKTLE
EEFKRINAI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031949XLOC_031949Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050447TCONS_00050447Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 39..89
e-value: 2.6E-9
score: 37.6
NoneNo IPR availableGENE3D3.40.50.300coord: 2..158
e-value: 5.7E-26
score: 91.1
NoneNo IPR availableCDDcd03221ABCF_EF-3coord: 61..128
e-value: 7.25523E-31
score: 109.075
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..131

Blast
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BLAST of TCONS_00050447-protein vs. Swiss-Prot (Human)
Match: ABCF3 (ATP-binding cassette sub-family F member 3 OS=Homo sapiens GN=ABCF3 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 1.316e-63
Identity = 88/153 (57.52%), Postives = 122/153 (79.74%), Query Frame = 0 
Query:    3 RAMRVGYFSQHHVDALSLKQTSLEFFKKRFPGKLDVEYRSHLGKYGVTGDLAMRPISSLSGGQKSRVAFALMTWHEPNFFILDEPTNHLDIETVEALGKALQKFNGGVILVSHNEQLIQMIAQETWLCGEKTVKRIDGGFQAYKKTLEEEFKR 155
            R +++GYFSQHHV+ L L  +++E   ++FPG+ + EYR  LG+YG++G+LAMRP++SLSGGQKSRVAFA MT   PNF+ILDEPTNHLD+ET+EALG+AL  F GGVILVSH+E+ I+++ +E W+C    V R++GGF  Y+  L+E+F+R
Sbjct:  553 RNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPLASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNNFRGGVILVSHDERFIRLVCRELWVCEGGGVTRVEGGFDQYRALLQEQFRR 705
The following BLAST results are available for this feature:
BLAST of TCONS_00050447-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCF31.316e-6357.52ATP-binding cassette sub-family F member 3 OS=Homo... [more]
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