TCONS_00048596-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048596-protein
Unique NameTCONS_00048596-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length314

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048596-protein ID=TCONS_00048596-protein|Name=TCONS_00048596-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MAGQVKYDILPFIDTSGKDSFEAGGNTSNGSQDVKTENKTATKSEDIEST
RIDHAKSFSKFQNKYLDTSRADFSDSISLNQKTGFDLRSIYEIVGERVVK
ETPQQKYQRLQSELAELSTELEQIKELNETKTNEQNPVLLAEQVKKLQTE
LHNLHLEKVLGPATTGTNGVEPGTWSKQISSHLKSFNDTKSSEEGVKESG
IVYEMYYKPEHAKFSQTSKISELENKLKAIENYVGKDTGKMQTVISDPDT
QSATLMDTAAAIHAKLTLFDVSHIEIIAARLQGLLHCINEISQKKETIEN
VERETKVGITVSNH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030905XLOC_030905Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048596TCONS_00048596Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 284..304
NoneNo IPR availableCOILSCoilCoilcoord: 107..134
NoneNo IPR availableGENE3D1.20.120.330coord: 94..306
e-value: 7.5E-5
score: 21.9
NoneNo IPR availablePFAMPF04912Dynamitincoord: 19..307
e-value: 1.0E-58
score: 199.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..48

Blast
[Close]
BLAST of TCONS_00048596-protein vs. Swiss-Prot (Human)
Match: DCTN2 (Dynactin subunit 2 OS=Homo sapiens GN=DCTN2 PE=1 SV=4)

HSP 1 Score: 156.377 bits (394), Expect = 1.626e-44
Identity = 109/317 (34.38%), Postives = 183/317 (57.73%), Query Frame = 0 
Query:    6 KYDILPFIDTSGKDSFEAGGNTSNGSQDVKTENKTATKSEDIESTRIDHA-----KSFSKFQNKYLDTSRADFSDSISLNQKTGFDLRSIYEIVGERV-VKETPQQKYQRLQSELAELSTELEQIKE-LNETKTNEQ-NPVLLAEQVKKLQTELHNLHLEKVLGPATTGTNGVEP-GTWSKQISSHLKSFNDTKSSEEGVKE------SGIVYEMYYKPEHAKFSQTSKISELENKLKAIENYVGKDTGKMQTVISDPDTQSATLMDTAAAIHAKLTLFDVSHIEIIAARLQGLLHCINEISQKKETIENVERETKV 307
            KY  LP I  +  D +E        + D+  +++    +E++ ST ++H       ++ KF++K + T   DFSD I   ++TG++    YE++GE + VKETPQQKYQRL  E+ EL+TE+E+IK  + E+ T E+  PVLLA+Q+  L+ +L   HLEK+LGP     N  +P G  +K++   L++  ++K    G         S + YE++ +PE  KFSQ +K++ELE +L  +E  V  D      + +    Q A LM+T   + AK++  D++ ++ + ARLQ +L  +NEI++ K ++E+ + ++KV
Sbjct:    5 KYADLPGIARNEPDVYE--------TSDLPEDDQAEFDAEELTSTSVEHIIVNPNAAYDKFKDKRVGTKGLDFSDRIGKTKRTGYE-SGEYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVEKIKTTVKESATEEKLTPVLLAKQLAALKQQLVASHLEKLLGP-DAAINLTDPDGALAKRLLLQLEATKNSKGGSGGKTTGTPPDSSLVTYELHSRPEQDKFSQAAKVAELEKRLTELETAVRCDQDAQNPLSAG--LQGACLMETVELLQAKVSALDLAVLDQVEARLQSVLGKVNEIAKHKASVEDADTQSKV 309
The following BLAST results are available for this feature:
BLAST of TCONS_00048596-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCTN21.626e-4434.38Dynactin subunit 2 OS=Homo sapiens GN=DCTN2 PE=1 S... [more]
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