TCONS_00048208-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048208-protein
Unique NameTCONS_00048208-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2786

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048208-protein ID=TCONS_00048208-protein|Name=TCONS_00048208-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2786bp
MEQIFSSGVTVHPEFIRALSSFNVINVYFSYNGICADERKPPTVVNPIPV
LQTSYCGSISFIIPENTFNDEIDGNTRNLQLSMTYQNGSDLGRDDIIAFD
AQNQHLYVTPVSSYFKDVLQPMKVILRATTNRGLYVTTSIEVIVQNPPPR
YSFSVKVTGEWSTTDVFSKVLQDLQQKTSTYLGYSTPQVHLINTLRHSST
FTVTFAFCNLKYEPCDKKQIGIITNQIKDQNNPHLKYKNALAPVIRLLTL
MTIPSGPCSEGDNPPAVTRPIPDVTLNMCSAFKYDMDPNTFTDLEDGNNL
QFVLTSINNVPIDETTTWIYATTDKTVLATVGNSVYQTSKSFKINVRGYD
KKQQYADTIWNIHIIGHSKKVYHSYKLTLTPNVQSNQAFKDKYRISMLTN
TYFGGNITNIISLEYQDSGRTILFVFSSCALPEYCDPNGARDFLSRLQTQ
GYKDQLSSDYVLTGVDMQSDSVCNGPLNPPTPSRIAWDLEVNVCGGLNIN
VPSNMFIDSEDGDTRKLRLKFSSSRHSIVLPKWISFDILNQMLHVLPTYQ
EALDFSQTQATYRLTATDSSGLSTDIVIRFKFNLPNQQAKYQFRFQYRYT
GVTLSEEASRRLFLDSLTGYLASAQDAISIYSYTPNVSAGSTKEIVFGDC
SITYSPSCDLASLKNLKSRLMNDNNFPQSAFQQAMLKGGISLLFGLTVIE
PPCTETYNPPRVENRIPTIKIQLCGGTQQYVVPSNTFYDPQDGRNLAYIM
STVQGVAFDDQSWIQFESETRQISMFPLVITGIVEVSTFVYSVKATDSSS
LAASTPATIIVEGPREILKECQIRVQLRVATTSPFNLIKRLETLHARFTS
FFRMTKNEGIAFVKYINLGQSRFTLSFSYCSAMYTSSILNVDYQNFINKI
LRRTFQNDRKTPTRSFLTAFGNDFTVEKVETQFSGRCLNIPPVTPENQQP
ISLSVSTCGYQQTMVNENLFYDFEDGTTSNLKLELYDSQGILMPQEHWVN
IDQTSRSIIAICNDQIRNTKDTVFIYRLRASDANGASKDVSVQVIKTMST
QYQIAPFEVTFEVSFNGNRNRPMVYETMSLIQQIKSFYGMTQNPSIYIKK
YTQSPGFPNYKTLTWTSCTSNLCSTNGILDKTKTLYNSRTGQLSNTFVSA
FSPQFDVKRVYYMSTQCTPATDPPNVLTSIPELTPSYCSIFTYNLPKDIF
YDKVNGETPNLKLSLLDSTGNLVASPSMLQLNQARLQLFAINVQGYTPRA
VTYQLAATNSKKLTTTTRFQVRYTSTPYIADCPITISFSYKHLTSTTSDL
DVLIQMVNTITQYYKDQTIKIKVLNFKRLTNTMFQMQWTNCSFQYSTYKQ
ALNGLSESQRSELTYIFSQIVNLNVINPDFNKAVSSVFDLNSISYSFNCI
EKGPKPGNTEPQREFATYCQKFERKLQNDLFTDERDGDIRNMKLHLVYIT
GEPISKSEWLQLDTTDRNNQFLYGMVTPKIEANTPNRTYFYDIVCTDSSG
RTAKKRLQIQIYGSKPSSFTNIITLGLTSKYSMKLPDAYVLRQLTDQLAN
YQNPLDTSTRLFVWYFNRSSMLSFSYCQLSCTQQNMDSLYSKFQVMKYRT
QPSITLQSVLQNGFNIDYVFMDTSSCLSSTNINIIVNQCPSITILICGSF
AQMIPRSCFSDTSGSDTRAFLLDLKTTSGDNLPASSWLQFDIPRQTIYGS
VVIDRALQSQTYTIQAKHPSSGDVALSNIQININGFHDYKSIRNEVCKIT
IEFTEKHKYYTKDADLLQNLLSTIAKYTNNPSNALMTMAFKREQGIYRLT
YGNCTWLQQLQQGIPTNTYLQSVNQVLEQYFRITQTTVVGLTSDFQSFLS
KNGYQYSNVMASSGCTQPPNPPPTRVKDIDIIVEQPCGIFEYQVPEDVFI
DRKYGNTRQLFLELFKDDGETAPSWIGVDSKQMIYGMIDKKVSQLQPTNG
YSFKLKATNRVGQNSMTSVHVQLKNKIWTSEFFSIVMQTIPSQEKKNHLP
YKVGLVRKMQEYEGFKYFTGNFYVQAMNSIPLFNLIRISYCEQCSATNLL
IAETFQLFSVQQKLITYLVPSFTVQGNFIIELPKMDQVTRECRGLPAANI
KPIEMTVKFCQRNLWLLSDMWTGSIEKFRVLFLNENGSPIESDSWIYLVS
DPYRIIAFPTEEQWRQQMEKRYRYKLEIRDSKTNELLGSPHYYNFKIEGT
PKSDGLTYTMVLATSAKVSVMTDVRFINEVWTKIDSYMGGVAHLQHIELK
RTGVIAEITWFNCSLPTNCESAETLEVKNKLSIGNTVNEGLKTLFGSEYQ
IQSISTTCSDSNPIVQPELNLTIPLCGCFVYQLPDQFAVDEKDGQNLDIE
LLAENGVTRLTRTSWVVYKSSTRTIEAMPDASVISLYNQQKGYVYILKVM
DTTGKFSTSKVTIRLNVTDTGLDEYLTYTFSFQSSYPVSFTYVDLKKTFL
RYFVREIKPGQQESIEGYQVLSLAVIDQTRQEFMIKIKDCSVTEYTCPTR
YQDKLQTSDTLVSSGSMRFIQQMSFWTSGKITISIGDISKIMTTRINQPP
IFANTMKTIDVTYCRNGGFDIPPNSFRDENPGKISYKLYQQDGTPVAVTN
WVNLVGNRVYVSPLTSVPPNTYTYKLEAIDECDLKADTDLVVRLSGDQTS
TPYSLIMQFHYKNIQKNYAHSIANVREAVQRCRGLMTSNAMITDGIKTEQ
FLYDSSGYMRFTWSDCNLQTRPCLQVNLDKLTAPIFSSPNLVSNTFKECF
RPECELLDVRESRTGDCRPPETPPAVRIQPRFNTXW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030679XLOC_030679Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048208TCONS_00048208Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR030398SEA_DG_dom
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2541..2644
e-value: 0.0064
score: 16.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2311..2421
e-value: 0.079
score: 13.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 703..813
e-value: 0.011
score: 15.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 994..1976
e-value: 0.28
score: 10.8
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 1051..1167
score: 11.493
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 2200..2311
score: 11.797
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1635..1736
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 41..148
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 724..813

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048208-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top