TCONS_00047727-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047727-protein
Unique Name	TCONS_00047727-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	156

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047727-protein ID=TCONS_00047727-protein|Name=TCONS_00047727-protein|organism=Clytia hemisphaerica|type=polypeptide|length=156bp
MTEEALACNCTGIRSCLLCNKYSSSSTNHNTQIQYYWFCPSCGKMFNGSI
QIPPSDAIEHSNAFYNWCQLHEDNTPSQLQIEGIHITQAFVTSEEERALV
TGIDEGEWKLSQSGRRKQDFGPKANFKKRKVKLGSFNGFPSYTEKLIGKL
PTNERL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030394	XLOC_030394	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047727	TCONS_00047727	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027450	AlkB-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	GENE3D	2.60.120.590		coord: 62..152 e-value: 1.7E-6 score: 27.3

Blast

[Close]

BLAST of TCONS_00047727-protein vs. Swiss-Prot (Human)
Match: ALKB4 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 OS=Homo sapiens GN=ALKBH4 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.386e-21
Identity = 49/146 (33.56%), Postives = 71/146 (48.63%), Query Frame = 0

Query:    8 CNCTGIRSCLLCNKYSSSSTNHN---TQIQYYWFCPSCGKMFNGSIQIPPSDAIEHSNAFYNWCQLHEDNTPSQLQIEGIHITQAFVTSEEERALVTGIDEGEWKLSQSGRRKQDFGPKANFKKRKVKLGSFNGFPSYTEKLIGKL 150
            C C GIR+CL+C +   S         +   + +C   G               E S+ F  W               G+ + + FVT EEE  LV  +D   WKLSQSGRRKQD+GPK NF+K+K+K   F G PS++ +++ ++
Sbjct:   15 CGCKGIRTCLICERQRGSDPPWELPPAKTYRFIYCSDTGWAVG----------TEESD-FEGWA----------FPFPGVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFRKQKLKTEGFCGLPSFSREVVRRM 139

The following BLAST results are available for this feature:

BLAST of TCONS_00047727-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047727-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ALKB4	3.386e-21	33.56	Alpha-ketoglutarate-dependent dioxygenase alkB hom...	[more]

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TCONS_00047727-protein (polypeptide) - C. hemisphaerica