TCONS_00047522-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047522-protein
Unique NameTCONS_00047522-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length402

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047522-protein ID=TCONS_00047522-protein|Name=TCONS_00047522-protein|organism=Clytia hemisphaerica|type=polypeptide|length=402bp
MKGPLAGIRICDMTRVLAGPYCTMVLADIGAEVIKIEKPGSGDDTRKWGP
PFINGHSYYFLSINRNKKSLAVDVATKSGREIIHELSKKSDVFIENFVPE
KLDSMSLGYNAISKVNPQIIYCSLTGYGSRGPDKLLPGYDLMASAIGGGM
HITGQKDGRPMRHGVATTDILTGLYAHSAIIAALYERTLSGKGKKIDCSL
LQSQIASMHSHASSYLNANQSTTRMGTEHPNISPYQAFDAKDGCFVIAAA
NDKHFRSLCHALELSDIAMDGRFITNPKRVENRDILTNIIQEKISEHSTD
YWIHRLEESGVPCGPVNDIGQAYEQPMVKNRIQEFDDPIYGHLRLPGPAV
DFEYDDFGEETSIPSPPPLLGEHTRKVLQDILNFDAPHIQDLLDRKVIQT
PT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030271XLOC_030271Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047522TCONS_00047522Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023606CoA-Trfase_III_dom
IPR003673CoA-Trfase_fam_III
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023606CoA-transferase family III domainGENE3D3.40.50.10540coord: 1..402
e-value: 6.7E-138
score: 459.3
IPR023606CoA-transferase family III domainSUPERFAMILY89796CoA-transferase family III (CaiB/BaiF)coord: 3..398
IPR003673CoA-transferase family IIIPFAMPF02515CoA_transf_3coord: 5..374
e-value: 9.8E-119
score: 396.6

Blast
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BLAST of TCONS_00047522-protein vs. Swiss-Prot (Human)
Match: SUCHY (Succinate--hydroxymethylglutarate CoA-transferase OS=Homo sapiens GN=SUGCT PE=1 SV=2)

HSP 1 Score: 389.808 bits (1000), Expect = 2.242e-133
Identity = 189/397 (47.61%), Postives = 262/397 (65.99%), Query Frame = 0 
Query:    4 PLAGIRICDMTRVLAGPYCTMVLADIGAEVIKIEKPGSGDDTRKWGPPFINGHSYYFLSINRNKKSLAVDVATKSGREIIHELSKKSDVFIENFVPEKLDSMSLGYNAISKVNPQIIYCSLTGYGSRGPDKLLPGYDLMASAIGGGMHITGQKDGRPMRHGVATTDILTGLYAHSAIIAALYERTLSGKGKKIDCSLLQSQIASMHSHASSYLNANQSTTRMGTEHPNISPYQAFDAKDGCFVIAAANDKHFRSLCHALELSDIAMDGRFITNPKRVENRDILTNIIQEKISEHSTDYWIHRLEESGVPCGPVNDIGQAYEQPMV--KNRIQEFDDPIYGHLRLPGPAVDFEYDDFGEETSIPSPPPLLGEHTRKVLQDILNFDAPHIQDLLDRKVI 398
            PL G++I D+TRVLAGP+ TM L D+GAEVIK+E+PG+GDDTR WGPPF+   S Y+LS+NRNKKS+AV++    G +II EL+   DVF+EN+VP KL +M LGY  I ++ P IIYCS+TGYG  GP     GYD +ASA+ G MHITG ++G P+R GVA TD+ TGLYA+ AI+A L ++  +GKG  IDC+LL SQ+A +   A++YL   +   R GT H +I PYQAF  KDG  V+ A N++ F ++C  L+L ++  + ++ TN  RV NR  L  I+ E+  E  T  W++  E SGVP GP+N++   + +P V     + E + P  G + +PGPAV   Y  F  + S   PPPLLG+HT  +L+++L +D   I +LL   V+
Sbjct:   47 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAV--RYSKF--KMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVV 439
The following BLAST results are available for this feature:
BLAST of TCONS_00047522-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SUCHY2.242e-13347.61Succinate--hydroxymethylglutarate CoA-transferase ... [more]
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