TCONS_00047294-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047294-protein
Unique NameTCONS_00047294-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1018

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047294-protein ID=TCONS_00047294-protein|Name=TCONS_00047294-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1018bp
MESVWWVFSELHKKGLVYRGYKVMPYSWKVNTPVSNFEANQNYKDVVDPA
VIVSFPLVESPDVSMLAWTTTPWTLPSNLALVVHPDLQYVKVKDNKTEKT
YIMMEARLSALFKSEEEYTILEKFLGKTLTGKKYQPLFNYFEQMKETGAF
QIVADTYVTEDSGTGVVHSAPAFGEDDHRICISKNILVKGGNIPCPVDPS
GKFTDEVPDFKGLHVKEADKPIIKKLKENNRLVHQGTIKHSYPFCWRSDT
PLIYKAVPGWFVNVEKFVPNLLKNNKECYWVPEFVKEKRFHNWLENARDW
NISRNRYWGTPIPLWVSDDYEEVVCIGSIEQLEKLSGKKITDLHREHVDD
ITIPSQQGKGQLRRVSEVFDCWFESGSMPYAQQHYPFENKEVFEQSFPAD
FIAEGVDQTRGWFYTLLVLSTALFDKPPYKNLIVNGLVLAKDGEKMSKRK
KNFPDPTKVIDKYGADALRLYLINSPVVRADTLKFREEGVRDVIKDVFLP
WYNAYRFLMQNIDVQQKNHGFKFSYDASKLKASDNIMDRWIISFAQSLLL
FIKQEMAAYRLYTVVPKLVKFIDNLTNWYVRSNRKRLRGETGAEDGLCAL
NTLFTVVLTLVRVMAPYTPFLTEHMYQNMKNYVTDDSIKEVEKGSVHFLM
LPQPREDLIYLDVERAVSRMQTVIELGRVARDRKTLPLKYPLPEFVILHN
DEKYMEDITSLQSYVLEELNVKHVTTSKEKEKYGLKLKADLDFQRLGRRL
KQDFKKVQAAIKTVSEEDLKAFQTNGKLTVAGHELDADDVKINYAFGDST
STKYEPHSDGEVVILLDTTPDQSMLDEGIAREIVNRIQKLRKKAKLVPTE
EITIVVEVQAGKDVAAYNKLSDVSKSHLQFIEDSIKQPVMNTQPSSCNEE
IIQEVVECKGANLDLRILRGKVSNDGTGAQPSPFCRFVNVQLMGVPPSGV
KSQRGTILLENPKGEYSISNEDFKRQVALVFGLQNQNFMLTSSKDSSEEM
TGLVSKLAGNTIFVKPKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030125XLOC_030125Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047294TCONS_00047294Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002301Ile-tRNA-ligase
IPR002300aa-tRNA-synth_Ia
IPR009080tRNAsynth_Ia_anticodon-bd
IPR013155M/V/L/I-tRNA-synth_anticd-bd
IPR033709Anticodon_Ile_ABEc
IPR009008Val/Leu/Ile-tRNA-synth_edit
Vocabulary: Biological Process
TermDefinition
GO:0006428isoleucyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004822isoleucine-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000049tRNA binding
GO:0002161aminoacyl-tRNA editing activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006428 isoleucyl-tRNA aminoacylation
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0002161 aminoacyl-tRNA editing activity
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004822 isoleucine-tRNA ligase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0000049 tRNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002301Isoleucine-tRNA ligasePRINTSPR00984TRNASYNTHILEcoord: 66..89
score: 67.26
coord: 404..413
score: 83.57
coord: 364..377
score: 58.42
coord: 240..255
score: 65.85
IPR002301Isoleucine-tRNA ligaseTIGRFAMTIGR00392TIGR00392coord: 1..706
e-value: 3.4E-227
score: 754.6
IPR002300Aminoacyl-tRNA synthetase, class IaPFAMPF00133tRNA-synt_1coord: 1..481
e-value: 1.7E-174
score: 581.3
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingGENE3D1.10.730.10coord: 422..732
e-value: 4.1E-55
score: 186.6
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingSUPERFAMILY47323Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasescoord: 500..757
IPR013155Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingPFAMPF08264Anticodon_1coord: 538..692
e-value: 2.9E-22
score: 79.2
NoneNo IPR availableGENE3D3.90.740.10coord: 46..339
e-value: 1.3E-100
score: 335.7
NoneNo IPR availableCDDcd00818IleRS_corecoord: 251..485
e-value: 6.46356E-111
score: 348.453
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 242..495
coord: 1..43
IPR033709Isoleucyl tRNA synthetase type 2, anticodon-binding domainCDDcd07961Anticodon_Ia_Ile_ABEccoord: 485..678
e-value: 1.76828E-82
score: 265.184
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainSUPERFAMILY50677ValRS/IleRS/LeuRS editing domaincoord: 44..242

Blast
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BLAST of TCONS_00047294-protein vs. Swiss-Prot (Human)
Match: SYIC (Isoleucine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=IARS PE=1 SV=2)

HSP 1 Score: 1244.18 bits (3218), Expect = 0.000e+0
Identity = 599/1016 (58.96%), Postives = 760/1016 (74.80%), Query Frame = 0 
Query:    1 MESVWWVFSELHKKGLVYRGYKVMPYSWKVNTPVSNFEANQNYKDVVDPAVIVSFPLVESPDVSMLAWTTTPWTLPSNLALVVHPDLQYVKVKDNKTEKTYIMMEARLSALFKSEEEYTILEKFLGKTLTGKKYQPLFNYFEQMKETGAFQIVADTYVTEDSGTGVVHSAPAFGEDDHRICISKNILVKGGNIPCPVDPSGKFTDEVPDFKGLHVKEADKPIIKKLKENNRLVHQGTIKHSYPFCWRSDTPLIYKAVPGWFVNVEKFVPNLLKNNKECYWVPEFVKEKRFHNWLENARDWNISRNRYWGTPIPLWVSDDYEEVVCIGSIEQLEKLSGKKITDLHREHVDDITIPSQQGKGQLRRVSEVFDCWFESGSMPYAQQHYPFENKEVFEQSFPADFIAEGVDQTRGWFYTLLVLSTALFDKPPYKNLIVNGLVLAKDGEKMSKRKKNFPDPTKVIDKYGADALRLYLINSPVVRADTLKFREEGVRDVIKDVFLPWYNAYRFLMQNIDVQQKNHGFKFSYDASKLKASDNIMDRWIISFAQSLLLFIKQEMAAYRLYTVVPKLVKFIDNLTNWYVRSNRKRLRGETGAEDGLCALNTLFTVVLTLVRVMAPYTPFLTEHMYQNMKNYVTDDSIKEVEKGSVHFLMLPQPREDLIYLDVERAVSRMQTVIELGRVARDRKTLPLKYPLPEFVILHNDEKYMEDITSLQSYVLEELNVKHVTTSKEKEKYGLKLKADLDFQRLGRRLKQDFKKVQAAIKTVSEEDLKAFQTNGKLTVAGHELDADDVKINYAFGDST--STKYEPHSDGEVVILLDTTPDQSMLDEGIAREIVNRIQKLRKKAKLVPTEEITIVVEVQAGKDVAAYNKLSDVSKSHLQFIEDSIKQPVMNTQPSSCNEEIIQEVVECKGANLDLRILRGKVSNDGTGAQPSPFCRFVNVQLMGVPPSGVKSQRGTILLENPKGEYSISNEDFKRQVALVFGLQNQNFMLTSSKDSSEEMTGLVSKLAGNTIFV 1014
            MESVWWVF +L+ KGLVYRG KVMP+S   NTP+SNFE++QNYKDV DP+V V+FPL E   VS++AWTTTPWTLPSNLA+ V+P++QYVK+KD    +  I+MEARLSAL+K E +Y ILE+F G  L GKKY+PLF+YF + KE GAF ++ D YV E+ GTGVVH AP FG +D+R+C+  NI+ K     CPVD SG FT EV DF G +VK+ADK II+ LKE  RL+   T  HSYPFCWRSDTPLIYKAVP WFV VE  V  LL+NN  CYWVPE V+EKRF NWL++ARDW ISRNRYWGTPIPLWVSDD+EEVVCIGS+ +LE+LSG KI+DLHRE VD +TIPS+ GKG L R+SEVFDCWFESGSMPYAQ HYPFENK  FE +FPADFIAEG+DQTRGWFYTLLVL+TALF +PP+KN+IVNGLVLA DG+KMSKRKKN+PDP  +I KYGADALRLYLINSPVVRA+ L+F+EEGVRDV+KDV LPWYNAYRFL+QN+   QK    +F Y+ + ++ S NI DRWI+SF QSL+ F + EMAAYRLYTVVP+LVKF+D LTNWYVR NR+RL+GE G ED + AL TLF+V+L+L R+MAPYTPFLTE MYQN+K  +   S+++ +  S+H+LMLP+ RE+LI    E AVS+MQ+VIELGRV RDRKT+P+KYPL E V++H D + ++DI SL+ Y++EELNV+ VT S +K KYG++L+A+ D   LG+RLK  FK V  +IK +S E+L+ FQ  G + V GHEL  +D+++ Y F  +T  + ++E HSD + ++LLD TPDQSM+DEG+ARE++NRIQKLRKK  LVPT+EIT+  +    K    Y  L+ V +SH +FI  +IK P+     S  ++ +IQE  + KG+ L++ + RG        + P P C +VN+ +     +    Q G +LLENPKG+  +     K  V  +FG++N    +   +   +  T L+S L+G T+ V
Sbjct:  156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTLPSNLAVCVNPEMQYVKIKDVARGRLLILMEARLSALYKLESDYEILERFPGAYLKGKKYRPLFDYFLKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGAEDYRVCMDFNIIRKDSLPVCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLLVATTFTHSYPFCWRSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPSRCGKGSLHRISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDTLSIHYLMLPRVREELIDKKTESAVSQMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALKDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAFKAVMTSIKQLSSEELEQFQKTGTIVVEGHELHDEDIRLMYTFDQATGGTAQFEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYK---AKSEGTY--LNSVIESHTEFIFTTIKAPLKPYPVSPSDKVLIQEKTQLKGSELEITLTRG-------SSLPGPACAYVNLNIC----ANGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFGVKNTELAVFHDETEIQNQTDLLS-LSGKTLCV 1154
The following BLAST results are available for this feature:
BLAST of TCONS_00047294-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYIC0.000e+058.96Isoleucine--tRNA ligase, cytoplasmic OS=Homo sapie... [more]
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