TCONS_00045213-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045213-protein
Unique NameTCONS_00045213-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045213-protein ID=TCONS_00045213-protein|Name=TCONS_00045213-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
VRHDYMNEIANSVDIDLAFQLGVLEMKRFFNNMPQVALDKKSNLDFIEKE
IGLQRFLPNKVLDTMKSKDIRKGIQKLFKQYAEFKEDTCCFEFYTLLKSV
YRFDLEVYKCSLGGAWSIPVEVLVGPSDGISYRPEQASKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028796XLOC_028796Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045213TCONS_00045213Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR000299FERM_domain
IPR019748FERM_central
IPR011993PH_dom-like
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 1..99
e-value: 1.9E-26
score: 92.3
IPR000299FERM domainPROSITEPS50057FERM_3coord: 1..140
score: 17.684
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 1..99
e-value: 8.23845E-11
score: 53.4042
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 1..103
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 104..138

Blast
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BLAST of TCONS_00045213-protein vs. Swiss-Prot (Human)
Match: FAK1 (Focal adhesion kinase 1 OS=Homo sapiens GN=PTK2 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.683e-38
Identity = 62/132 (46.97%), Postives = 94/132 (71.21%), Query Frame = 0 
Query:    1 VRHDYMNEIANSVDIDLAFQLGVLEMKRFFNNMPQVALDKKSNLDFIEKEIGLQRFLPNKVLDTMKSKDIRKGIQKLFKQYAEFKEDTCCFEFYTLLKSVYRFDLEVYKCSLGGAWSIPVEVLVGPSDGISY 132
            V+ DYM EIA+ VD ++A +LG LE++R +  M   AL+KKSN + +EK++GL+RF P  +LD++K+K +RK IQ+ F+Q+A    +    +F+ +L  VYRFD E +KC+LG +W I VE+ +GP +GISY
Sbjct:  151 VKSDYMLEIADQVDQEIALKLGCLEIRRSYWEMRGNALEKKSNYEVLEKDVGLKRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEEGISY 282
The following BLAST results are available for this feature:
BLAST of TCONS_00045213-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAK11.683e-3846.97Focal adhesion kinase 1 OS=Homo sapiens GN=PTK2 PE... [more]
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