TCONS_00027887-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00027887-protein
Unique Name	TCONS_00027887-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	370

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00027887-protein ID=TCONS_00027887-protein|Name=TCONS_00027887-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
MFSGGFRGQKLKTSLRLSINRLKLMEKKKTELAQKARKEIADYITLNKYD
RARIRVEHIIREDYLVEAMELIELYCDLLLARFGLIESMKYCDEGLVESV
STIIWASPRLSTDCAEIKAVADQLVFKYGKEFGQQARSNSNHTVNERLIV
KLSPDPPPKILVERYLIEIARNYNVAFEPDPEVMMSEGIPSMDSKEFEAL
GAGGGLGFEPMGGPTPPGPPGNNSYPPPGGNSYPPPGGNPPPPGPPGGHS
GGYGGGSGGGGGMAYPPPSQGAPYPPGDVPPYPDDNSFGSKNSGPAPPYT
PGVNTGAPGNLGVPSAPGGGGAPGGGSINLPEIPTGSLHSNSNVGGQSSG
GDDVDFDDLTRRFEELKKKK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_015763	XLOC_015763	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00027887	TCONS_00027887	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005061	Ist1

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005061	Vacuolar protein sorting-associated protein Ist1	PFAM	PF03398	Ist1	coord: 12..175 e-value: 1.2E-60 score: 204.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..357

Blast

[Close]

BLAST of TCONS_00027887-protein vs. Swiss-Prot (Human)
Match: IST1 (IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 8.553e-96
Identity = 188/384 (48.96%), Postives = 229/384 (59.64%), Query Frame = 0

Query:    1 MFSGGFRGQKLKTSLRLSINRLKLMEKKKTELAQKARKEIADYITLNKYDRARIRVEHIIREDYLVEAMELIELYCDLLLARFGLIESMKYCDEGLVESVSTIIWASPRLSTDCAEIKAVADQLVFKYGKEFGQQARSNSNHTVNERLIVKLSPDPPPKILVERYLIEIARNYNVAFEPDPEVMMSEGIPSM-----------DSKEFEALGAGGGLGFEPMGGP--TPPGPPGNNSYPPPGGNSYPPPGGNPPPPGPPGGHSGGYGGGSGGGGGMAYPPPSQGAPYPPGDVPPYPD-DNSFGSKNSGPAPPYTPGVNTGAPGNLGVPSAPGGGGAPGGGSINLPEIPTG-SLHSNSNVGGQSSGGDDVDFDDLTRRFEELKKK 369
            M   GF+ ++L+ +LRL INRLKL+EKKKTELAQKARKEIADY+   K +RARIRVEHIIREDYLVEAME++ELYCDLLLARFGLI+SMK  D GL ESVST+IWA+PRL ++ AE+K VADQL  KY KE+G+  R+N   TVN+RL+ KLS + PPKILVERYLIEIA+NYNV +EPD  V+M+E  P +           D K+      G G    P+GGP  T P P            SYP P G     G P G    +              P+   P  P   P Y   D+    KN   A    PG    A   L  PS P    A    +  LPE+P+       ++ G  +S  +D+DFDDL+RRFEELKKK
Sbjct:    1 MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPD-SVVMAEAPPGVETDLIDVGFTDDVKKGGPGRGGSGGFTAPVGGPDGTVPMPMPMPMPSANTPFSYPLPKGPSDFNGLPMGTYQAF--------------PNIHPPQIPATPPSYESVDDINADKNISSAQIVGPGPKPEASAKL--PSRP----ADNYDNFVLPELPSVPDTLPTASAGASTSASEDIDFDDLSRRFEELKKK 363

The following BLAST results are available for this feature:

BLAST of TCONS_00027887-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00027887-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
IST1	8.553e-96	48.96	IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1	[more]

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TCONS_00027887-protein (polypeptide) - C. hemisphaerica