TCONS_00024119-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024119-protein
Unique NameTCONS_00024119-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length651

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024119-protein ID=TCONS_00024119-protein|Name=TCONS_00024119-protein|organism=Clytia hemisphaerica|type=polypeptide|length=651bp
MKENKQNKEMFEKIFSTDGFHKRICGFDFEEAFDIWNQKPQVANRRLAGA
LEITKEIDIIYDSDNVDDCVTCIKGILSNIEEDGFKQWYLENDDNIRNVL
SPMMEYFCFHKIYRTETNTIRLSVRKLLPRSIERYKNTYEMVLWKSDHSI
SAIMYIPLCTGETNETCLSSRSYVFVMVEPDRRIDVLTHQNFTTTDVPTH
CLVTSQEWLHTVLIKKITAWMEAASLSDHGLRKQQTLSQINIESYTQTYN
RLKKKYGPYFVENWTESTDAQKFVYEDIALASYLIVLWSKEREERDLLRK
QSFIDLGCGNGLLVHILSSEGHPGRGVDLARRKIWNMYGENTKLEVETIL
PDTTTVTEDWIIGNHSDELTPWIPVIASRSSFDTRYFVLPCCFHDFYNKF
HHKDQKKSHYESYLEHILQIGRECLFEVAQDMLRIPSTKRICQIGTRRNS
TYEQYNGVNLRIEKLLTQNSRQSVAMFNPRSTQNIVKNCTQIDNSIKDLV
IKTVSDLLLFSPEDSTVVERTEIDFVIDLEQKTSKGCPWSDWNRGGRIHL
NDIAQHFDGEILKEMKCQCGGLQTLLKNNGNIFKVVGGYVSIRDQRNPKD
KKPVKKKVVNKQGEERRKTKMCWFHLNHPQGCLFSSDICNYAHQKDELRT
I
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013549XLOC_013549Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024119TCONS_00024119Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011671tRNA_uracil_MeTrfase
IPR000571Znf_CCCH
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008168 methyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1000.10coord: 608..651
e-value: 1.7E-4
score: 20.8
NoneNo IPR availableGENE3D3.40.50.150coord: 223..354
e-value: 1.8E-4
score: 20.4
IPR011671tRNA (uracil-O(2)-)-methyltransferasePFAMPF07757AdoMet_MTasecoord: 240..347
e-value: 4.6E-39
score: 133.1
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 616..646
score: 10.023
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 234..334

Blast
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BLAST of TCONS_00024119-protein vs. Swiss-Prot (Human)
Match: TRM44 (Probable tRNA (uracil-O(2)-)-methyltransferase OS=Homo sapiens GN=TRMT44 PE=1 SV=2)

HSP 1 Score: 354.369 bits (908), Expect = 2.683e-112
Identity = 199/489 (40.70%), Postives = 276/489 (56.44%), Query Frame = 0 
Query:  208 WLHTVLIKKITAWMEAASLSDHGLRKQQTLSQINIESYTQTYNRLKKKYGPYFVENWTESTDAQKFVYEDIALASYLIVLWSKEREERDLLRKQSFIDLGCGNGLLVHILSSEGHPGRGVDLARRKIWNMYGENTKLEVETILPDTTTVTE--DWIIGNHSDELTPWIPVIASRSSFDTRYFVLPCCFHDFYNKFHHKDQKKSHYESYLEHILQIGRECLFEVAQDMLRIPSTKRICQIGTRRNSTYEQYNGVNLRIEKLLTQNSRQSVAM------FNPRSTQNIVKNCTQIDNSIK-DLVIKTVSD----------------LLLFSPEDS-------TVVERTEIDFVI-----------DLEQKTSKGCPWSDWNRGGRIHLNDIAQHFDGEILKEMKCQCGGLQTLLKNNGNIFKVVGGYVSIRDQRNP---KDKKP-VKKKVVNKQGEERRKTKMCWFHLNHPQGCLFSSDICNYAHQKDELR 649
            WL   L+ K+  W      SD     + TLS I+I  Y++ Y  LK+KY    V+ W E TD +KFVYED+A+A+YL++LW +ER ER L  +QSF+DLGCGNGLLVHILSSEGHPGRG+D+ RRKIW+MYG  T+LE + I P+  T+    DW+IGNHSDELTPWIPVIA+RSS++ R+FVLPCCF DF  ++  +  KK+ Y  YL+ I ++G  C F V +D LRIPSTKR+C +G  R  TY      ++  ++     SR+   +       +P        +    D     D  +  V+                 L  F P +          + R  ID V+            L  ++S+      WN G  + L ++A   D E L+ +K +CGGLQTLL+N+  +F+VV G V IRD R     K K+P  K+++++    E  KT++CWF ++HP GC  S+D C +AH   ELR
Sbjct:  269 WLGEELLAKLAKWSVENKKSDF----KSTLSLISIMKYSKAYQELKEKYK-EMVKVWPEVTDPEKFVYEDVAIAAYLLILWEEERAERRLTARQSFVDLGCGNGLLVHILSSEGHPGRGIDVRRRKIWDMYGPQTQLEEDAITPNDKTLFPDVDWLIGNHSDELTPWIPVIAARSSYNCRFFVLPCCFFDFIGRYSRRQSKKTQYREYLDFIKEVGFTCGFHVDEDCLRIPSTKRVCLVGKSR--TYPSSREASVDEKRTQYIKSRRGCPVSPPGWELSPSPRWVAAGSAGHCDGQQALDARVGCVTRAWAAEHGAGPQAEGPWLPGFHPREKAERVRNCAALPRDFIDQVVLQVANLLLGGKQLNTRSSRNGSLKTWNGGESLSLAEVANELDTETLRRLKRECGGLQTLLRNSHQVFQVVNGRVHIRDWREETLWKTKQPEAKQRLLS----EACKTRLCWFFMHHPDGCALSTDCCPFAHGPAELR 746
The following BLAST results are available for this feature:
BLAST of TCONS_00024119-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRM442.683e-11240.70Probable tRNA (uracil-O(2)-)-methyltransferase OS=... [more]
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