TCONS_00023098-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023098-protein
Unique NameTCONS_00023098-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length203

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023098-protein ID=TCONS_00023098-protein|Name=TCONS_00023098-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MLDDTEDIALNFGDEGAGKNKRFKHPVAAFFHIVFRLLALVFYFLANLFT
NSFVTMFVILVLLLSFDFWVVKNVTGRLLVGLRWWNYIDEDGNSQWMFEA
RKKKKGAKSKTLAAESRLFWLGLVIFPIIWVFLLVVSLLSFKLTNVLIIF
VAIVLTSSNLVGYIKCKKDAGKDVQSMASNFLGRQILTQMFKANTTKEEG
GSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012977XLOC_012977Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023098TCONS_00023098Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008564DUF846_euk
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008564Protein of unknown function DUF846, eukaryoticPFAMPF05832DUF846coord: 24..166
e-value: 4.5E-49
score: 165.9

Blast
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BLAST of TCONS_00023098-protein vs. Swiss-Prot (Human)
Match: TV23B (Golgi apparatus membrane protein TVP23 homolog B OS=Homo sapiens GN=TVP23B PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 2.365e-65
Identity = 90/190 (47.37%), Postives = 129/190 (67.89%), Query Frame = 0 
Query:    3 DDTEDIALNFGDEGAGKNKR---FKHPVAAFFHIVFRLLALVFYFLANLFTNSFVTMFVILVLLLSFDFWVVKNVTGRLLVGLRWWNYIDEDGNSQWMFEARKKKKGAKSKTLAAESRLFWLGLVIFPIIWVFLLVVSLLSFKLTNVLIIFVAIVLTSSNLVGYIKCKKDAGKDVQSMASNFLGRQILTQ 189
            DDTED++L   +E      R    +HPVA+FFH+ FR+ A++ Y L  L ++SF+T  V ++LLLS DFW VKNVTGRL+VGLRWWN+IDEDG S W+FE+RK+          AESR+FWLGL+  P++WV     +L SF++  + ++ + +VL  +NL GYI+CK  + K + SMA+++ G+Q L Q
Sbjct:    8 DDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCGLLSSSFITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFAFSALFSFRVKWLAVVIMGVVLQGANLYGYIRCKVRSRKHLTSMATSYFGKQFLRQ 197
The following BLAST results are available for this feature:
BLAST of TCONS_00023098-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TV23B2.365e-6547.37Golgi apparatus membrane protein TVP23 homolog B O... [more]
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