TCONS_00022638-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022638-protein
Unique NameTCONS_00022638-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length821

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022638-protein ID=TCONS_00022638-protein|Name=TCONS_00022638-protein|organism=Clytia hemisphaerica|type=polypeptide|length=821bp
MSNHRRPSEGLPLYPIRRPSRNSEREPLLSHRSSFSSMAEHLSSNSRTPY
TPLHTPKSSINSKPVDTPEYSGLSDIANHLEVSHEDPRQQIISSKFESLD
YDTCENGLEKREQRQFTAEKYIQMNLYRWVIMLVIGLLTAFVAVGIDISI
EQLAGWKYQIIKHQLDKCLDSSCLALPYAMWVCLNCAFVLFATLMVVYAE
PVAAGSGIPQIKCYLNGVKIPHVVRIKTLITKVVGVVFSVAGGLAVGKEG
PMIHTGAVIAAGISQGRSTTFGRDFHMFEMFRTDHEKRDFVAGGAAAGVA
AAFGAPVGGVLFALEEGSSFWNQALTWRMFFSSMIASFTLNVLLSIYHGH
AGNLGYPGLINFGQFNGSYQGYEIPLFMVMGVVGGLFGALFNAINHHLSI
FRVRFIKNRPMRVIEALLVATMSSCVAFSLIYFHNDCRPVGTFNTTATLQ
FFCPDGEFSAMGTLVFSTPEQSAKSLFHADRGMHSIITLISHFCCYFILA
TWTYGLYVPSGLFVPVILCGAAMGRLFGECVYLAFPNGTWSSPGTYALIG
AASLLGGVMRMTISLCVIVMEATGDITYGLPLMLCIIVAKWVGDFFNEGI
YDIHIKLAGVPFLDWEPPQLTSNITMSQVMKTPVVCFHTEERVSRIIDVL
KNTASHHNGFPVVDNVPQTVEGRRKTFGTFRGTILRSQLIILLKQKVFHE
RGTTHTRKHRLTIKDFRDAYPRFPPIRNINISHRERECYIDLRPFMNPAP
YTILEKSSLNRGFRLFRALGLRHLVVVNENNQVIGIVTRKDLARYRTWQH
RGQMGTEELTIMHHSHENEAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012712XLOC_012712Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022638TCONS_00022638Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001807Cl-channel_volt-gated
IPR000644CBS_dom
IPR014743Cl-channel_core
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006821chloride transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005247voltage-gated chloride channel activity
GO:0005216ion channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006821 chloride transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005247 voltage-gated chloride channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001807Chloride channel, voltage gatedPRINTSPR00762CLCHANNELcoord: 232..251
score: 52.1
coord: 562..581
score: 48.9
coord: 600..614
score: 47.6
coord: 201..218
score: 63.78
coord: 544..560
score: 60.24
coord: 508..528
score: 59.71
coord: 296..315
score: 73.7
IPR001807Chloride channel, voltage gatedPFAMPF00654Voltage_CLCcoord: 188..594
e-value: 2.8E-97
score: 326.0
IPR000644CBS domainSMARTSM00116cbs_1coord: 749..797
e-value: 1.2E-8
score: 44.7
coord: 633..694
e-value: 0.12
score: 21.4
IPR000644CBS domainPFAMPF00571CBScoord: 745..795
e-value: 1.0E-7
score: 32.2
IPR000644CBS domainPROSITEPS51371CBScoord: 630..701
score: 8.61
IPR000644CBS domainPROSITEPS51371CBScoord: 746..804
score: 12.534
IPR014743Chloride channel, coreGENE3D1.10.3080.10coord: 109..612
e-value: 2.6E-147
score: 490.8
IPR014743Chloride channel, coreSUPERFAMILY81340Clc chloride channelcoord: 112..433
coord: 466..616
NoneNo IPR availableGENE3D3.10.580.10coord: 619..810
e-value: 1.5E-26
score: 92.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableCDDcd04591CBS_pair_EriC_assoc_euk_baccoord: 639..795
e-value: 2.27348E-22
score: 92.7004
NoneNo IPR availableCDDcd03685ClC_6_likecoord: 97..613
e-value: 0.0
score: 593.475
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 618..795

Blast
[Close]
BLAST of TCONS_00022638-protein vs. Swiss-Prot (Human)
Match: CLCN7 (H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2)

HSP 1 Score: 791.571 bits (2043), Expect = 0.000e+0
Identity = 412/734 (56.13%), Postives = 536/734 (73.02%), Query Frame = 0 
Query:   81 EVSHEDPRQQIISSKFESLDYDTCENGLEKREQRQFTAEKYIQMNLYRWVIMLVIGLLTAFVAVGIDISIEQLAGWKYQIIKHQLDKCLDSSCLALPYAMWVCLNCAFVLFATLMVVYAEPVAAGSGIPQIKCYLNGVKIPHVVRIKTLITKVVGVVFSVAGGLAVGKEGPMIHTGAVIAAGISQGRSTTFGRDFHMFEMFRTDHEKRDFVAGGAAAGVAAAFGAPVGGVLFALEEGSSFWNQALTWRMFFSSMIASFTLNVLLSIYHGHAGNLGYPGLINFGQFNGSYQGY---EIPLFMVMGVVGGLFGALFNAINHHLSIFRVRFIKNRPMRVIEALLVATMSSCVAFSLIYFHNDCRPVGTFNTTATLQFFCPDGEFSAMGTLVFSTPEQSAKSLFHADRGMHSIITLISHFCCYFILATWTYGLYVPSGLFVPVILCGAAMGRLFGECVYLAFPNGTWSSPGTYALIGAASLLGGVMRMTISLCVIVMEATGDITYGLPLMLCIIVAKWVGDFFNEGIYDIHIKLAGVPFLDWEPPQLTSNITMSQVMKTPVVCFHTEERVSRIIDVLKNTASHHNGFPVVDNVPQTVEGRRKTFGTFRGTILRSQLIILLKQKVFHERGTTHTRKHRLTIKDFRDAYPRFPPIRNINISHRERECYIDLRPFMNPAPYTILEKSSLNRGFRLFRALGLRHLVVVNENNQVIGIVTRKDLARYRTWQHRGQMGTEELTI 811
            E+ H    ++++S K+ESLDYD  EN L   E+R+     +  + + RWVI  +IG+LT  VA  IDI +E LAG KY++IK  +DK  +   L+    +W  LN AFVL  +++V + EPVAAGSGIPQIKC+LNGVKIPHVVR+KTL+ KV GV+ SV GGLAVGKEGPMIH+G+VIAAGISQGRST+  RDF +FE FR D EKRDFV+ GAAAGV+AAFGAPVGGVLF+LEEG+SFWNQ LTWR+FF+SMI++FTLN +LSIYHG+  +L  PGLINFG+F+     Y   EIP+F+ MGVVGG+ GA+FNA+N+ L++FR+R+I    ++VIEA+LVA +++ VAF LIY   DC+P+   + +  LQ FC DGE+++M    F+TPE+S  SLFH   G ++ +TL      YF LA WTYGL V +G+F+P +L GAA GRLFG  +        W+ PG YAL+GAA+ LGG++RMT+SL VI+MEAT ++TYG P+ML ++ AK VGD F EG+YD+HI+L  VPFL WE P  + ++T  +VM TPV C    E+V  I+DVL +TAS+HNGFPVV++   T   R       +G ILRSQLI+LLK KVF ER      + RL +KDFRDAYPRFPPI++I++S  EREC +DL  FMNP+PYT+ +++SL R F+LFRALGLRHLVVV+  NQV+G+VTRKDLARYR     G+ G EEL++
Sbjct:   82 EIPHN---EKLLSLKYESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLKYRVIKGNIDKFTEKGGLSFSLLLWATLNAAFVLVGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLSSPGLINFGRFDSEKMAYTIHEIPVFIAMGVVGGVLGAVFNALNYWLTMFRIRYIHRPCLQVIEAVLVAAVTATVAFVLIYSSRDCQPLQGGSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPLTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTPVTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPAR------LQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRLKDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRL----GKRGLEELSL 802
The following BLAST results are available for this feature:
BLAST of TCONS_00022638-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLCN70.000e+056.13H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens ... [more]
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