TCONS_00022374-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022374-protein
Unique NameTCONS_00022374-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length102

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022374-protein ID=TCONS_00022374-protein|Name=TCONS_00022374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=102bp
MSGGGTQEKLTRVAIVNTDRCKPKKCRQECKRSCPVVRQGKLCIEVVPTS
KVAFLSEHLCIGCGICVKKCPFEAITIINLPSNLETQTTHRYSANSFKLH
RX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012552XLOC_012552Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022374TCONS_00022374Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013283RLI1
IPR007209RNaseL-inhib_metal-bd_dom
IPR0178964Fe4S_Fe-S-bd
IPR0179004Fe4S_Fe_S_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013283RLI1PRINTSPR01868ABCEFAMILYcoord: 57..81
score: 78.88
coord: 84..102
score: 51.05
coord: 29..44
score: 64.75
IPR007209RNase L inhibitor RLI, possible metal-binding domainPFAMPF04068RLIcoord: 11..42
e-value: 2.6E-15
score: 55.8
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPFAMPF00037Fer4coord: 57..76
e-value: 1.4E-8
score: 34.1
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 12..36
score: 6.458
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 51..80
score: 10.255
NoneNo IPR availableGENE3D3.30.70.20coord: 64..100
e-value: 4.3E-6
score: 26.2
NoneNo IPR availableGENE3D3.30.70.20coord: 14..63
e-value: 8.9E-7
score: 28.2
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 14..100
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 60..71

Blast
[Close]
BLAST of TCONS_00022374-protein vs. Swiss-Prot (Human)
Match: ABCE1 (ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.115e-49
Identity = 73/94 (77.66%), Postives = 86/94 (91.49%), Query Frame = 0 
Query:    8 EKLTRVAIVNTDRCKPKKCRQECKRSCPVVRQGKLCIEVVPTSKVAFLSEHLCIGCGICVKKCPFEAITIINLPSNLETQTTHRYSANSFKLHR 101
            +KLTR+AIVN D+CKPKKCRQECK+SCPVVR GKLCIEV P SK+A++SE LCIGCGIC+KKCPF A++I+NLPSNLE +TTHRY AN+FKLHR
Sbjct:    3 DKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHR 96
The following BLAST results are available for this feature:
BLAST of TCONS_00022374-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCE11.115e-4977.66ATP-binding cassette sub-family E member 1 OS=Homo... [more]
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