TCONS_00021258-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021258-protein
Unique Name	TCONS_00021258-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	523

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021258-protein ID=TCONS_00021258-protein|Name=TCONS_00021258-protein|organism=Clytia hemisphaerica|type=polypeptide|length=523bp
MEEEMLGLGYEVEYFSSLTERVDSIVIVGENLTESSYPDFLKPYLEAIKN
LEEIDGAIKSDIAVVAVNAAVKRCIWAPTGPTNRDYDDVRRYKDAAIKGV
KRALKAGSKSPGIVVYTSEKQRESKRYKESIMVALLGAMEAVYVPIEIRE
ALPEKEKKITRLSISYNTSEINHDNLIKTAYGIEFGRLMARDIGGSDPER
MSAANTAKYVTEVFQGTSIKVKVIEDRDAFVKDYPLFAAVDRCATEVDRH
AGRIIELEYTSDNVSDTYMFVGKGVTYDTGGADVKAGGVMAGMHRDKCGA
ATVAGIFGMLEKLKPKGIKVVGRMAMVRNSIGKDCYVADEIITSAAGVRV
RVGNTDAEGRMAMTDPLYHTKQQALDEVNPHLFTIATLTGHAVVAVGPEY
TCIMDNGPAEETDTARTLQKIGHGLSNPFEISTIRREDYAFCDGRNEYED
LIQCNNQPSSRTPRGHQFPAAFMISASGLKKHGIDSDRPLKYTHMDIAGS
SGSYPGTPTGAPLIALAKMMKMF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011899	XLOC_011899	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021258	TCONS_00021258	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011356	Leucine_aapep/pepB
IPR000819	Peptidase_M17_C

Vocabulary: **Biological Process**
Term	Definition
GO:0019538	protein metabolic process
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0030145	manganese ion binding
GO:0008235	metalloexopeptidase activity
GO:0004177	aminopeptidase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019538	protein metabolic process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005622	intracellular
molecular_function	GO:0004177	aminopeptidase activity
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0008235	metalloexopeptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011356	Peptidase M17, leucine aminopeptidase/peptidase B	PRINTS	PR00481	LAMNOPPTDASE	coord: 290..311 score: 37.37 coord: 382..397 score: 49.77 coord: 268..285 score: 52.88 coord: 350..370 score: 46.74 coord: 328..349 score: 23.06
None	No IPR available	GENE3D	3.40.630.10		coord: 175..522 e-value: 8.6E-78 score: 261.1
None	No IPR available	SUPERFAMILY	53187	Zn-dependent exopeptidases	coord: 186..520
IPR000819	Peptidase M17, leucyl aminopeptidase, C-terminal	PFAM	PF00883	Peptidase_M17	coord: 189..512 e-value: 7.4E-59 score: 199.4
IPR000819	Peptidase M17, leucyl aminopeptidase, C-terminal	PROSITE	PS00631	CYTOSOL_AP	coord: 354..361

Blast

[Close]

BLAST of TCONS_00021258-protein vs. Swiss-Prot (Human)
Match: PEPL1 (Probable aminopeptidase NPEPL1 OS=Homo sapiens GN=NPEPL1 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 4.251e-18
Identity = 75/254 (29.53%), Postives = 110/254 (43.31%), Query Frame = 0

Query:  250 HAGRIIELEYTSDNVSDTYMFVGKGVTYDTGGADVKAGGVMAGMHRDKCGAATVAGIFGMLEKLKPKGIK--VVGRMAMVRNSIGKDCYVADEIITSAAGVRVRVGNTDAEGRMAMTDPL-YHTKQQALDEVNPHLFTIATLTGHAVVAVGPEYTCIMDNGPAEETDTARTLQKIGHGLSNPFEISTIRREDY--AFCDGRNEYEDLIQCNNQPSSRTPRGHQFPAAFMISASGLKKHGIDSDRPLKYTHMDIA 498
            H   +  L +T D  + T  +VGKG+ YDTGG  +K    M GM RD  GAA V G F    K   +G K  +     +  NS+G +    D+I    +G  V + NTDAEGR+ + D + Y  K    D +      +ATLTG   +A G  +  ++ N    E    +  +K G  +        +   ++  A  D +N   D    +N PSS         A   I++       I  D P  + H+DIA
Sbjct:  237 HPPALAVLSHTPDGATQTIAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIK---QGFKDNLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADII----LDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCGDLVHPLVYCPELHFSEFTSAVADMKNSVADR---DNSPSSC--------AGLFIASH------IGFDWPGVWVHLDIA 466

The following BLAST results are available for this feature:

BLAST of TCONS_00021258-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021258-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PEPL1	4.251e-18	29.53	Probable aminopeptidase NPEPL1 OS=Homo sapiens GN=...	[more]

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TCONS_00021258-protein (polypeptide) - C. hemisphaerica