TCONS_00021130-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021130-protein
Unique NameTCONS_00021130-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length187

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021130-protein ID=TCONS_00021130-protein|Name=TCONS_00021130-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
TLSTRWSKRIYVKTNNCDLKKLPLRGKDGARVVDAKYHAHKLRCEESETV
FLKREKGLEKQCRYKCKRCGLLLFSRHDKKTKITFIVDGAVVKGKTEENP
SLLKKQPQAKKVMVKKHTKEMGKFGSVTVSTVDEEEEELEAAEIASSYAQ
NARIISQQLTKRRTAQQKLTEEEAGKAKKPRGTLIDK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011837XLOC_011837Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021130TCONS_00021130Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..187

Blast
[Close]
BLAST of TCONS_00021130-protein vs. Swiss-Prot (Human)
Match: CX056 (UPF0428 protein CXorf56 OS=Homo sapiens GN=CXorf56 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.139e-45
Identity = 99/183 (54.10%), Postives = 127/183 (69.40%), Query Frame = 0 
Query:   16 NCDLKKLPLRGKDGARVVDAKYHAHKL-RCEESETVFLKREKGLEKQCRYKCKRCGLLLFSR-HDKKTKITFIVDGAVVK-----GKTEENPSLLKKQPQAKKVMVKKHTKEMGKFGSVTVSTVDEEEEELEAAEIASSYAQNARIISQQL-----TKRRTAQQKLTEEEAGKAKKPRGTLID 186
            +C L+KLP+R +D +RV+DA  HAHK    E+ ET++L+R +G+E+Q R KC +CGL LF +   K   +TFIVDGAVVK     GKT       +KQ   KKVM+ K TK+MGKF SVTVST+DEEEEE+EA E+A SYAQNA++I +QL     +KRR   Q+L E EA KAK  +GTLID
Sbjct:   42 DCQLEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETMYLRRPEGIERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVVKFGQGFGKTN---IYTQKQEPPKKVMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRL--QELAELEAKKAKM-KGTLID 218
The following BLAST results are available for this feature:
BLAST of TCONS_00021130-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CX0563.139e-4554.10UPF0428 protein CXorf56 OS=Homo sapiens GN=CXorf56... [more]
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