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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00020521-protein ID=TCONS_00020521-protein|Name=TCONS_00020521-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1269bp
MVRIRGNGRLENTLFLDKMMRKLSISMGKESEVLQAAQEGNLSKLESLFT
QKRFGGLLKGPNINGRDSSGCTALHLAALYGNSDACVFLLHNDASANVPD
NAGSFPLHLAAFNGHYEIAQTLISRGPSRAQVNEANMAGDTALHVASQYG
HEKVVKVLLGNYADASFRNSKDESPLDLAAQYGRLLTVELFLNYDRTLCY
KSPVHRHSPLHLAARNGHADVVRALLNYGMPVNATCDMGTALHCAATYGK
TAVAKLLIERGIDIEIEDDNGQKVLDILVKNPSQTSQEITGLIYAKPASS
SDAELSRSPATSYSGQQFEIVEHPKRKDMDNQEIISQPSGYDVVPPPRPK
PGKPKNDDNRPYSLIAATSLDNASDDENNLTRVQSTPIELNSKMKKDMFF
SKYDGDDKKKSGPYCLVGEDVPNLKTKKSVKQKRTSASVSRMTSLQPQEE
EVGATYSEIPEPGKRDSYYTQMNSADNVYQVPPNADFHHNQSPGNDDLYQ
VPPNRNDDLYQVPPTTNFPKRGTHLSDIPQPSTITPQDQMNIQEDYYGVP
SSLRKVDSKAINVPKPKQRSQTMPSEITSSPMENYDNVNLQHRPMSSSTE
CYDNVQITNSPMSGGENYDNVNIKNKENVQSDSYYQRPPTGSFNSAGSTE
GLFYQGSPNSPQSYYQRPPSLSSTPGDDQYYQAPPSNFKPKPLGGIKQSP
SQPQQYTSVKTKSMKQKRTATIVKRDIDLSDSPPEQKEILSDSPVPKLEE
SKQLTKEEIEAIERERKIQEAKENLLAQANIDEPEGSPKPVPKPRMKQSR
TSERRVESGYRMSETAAKQPLDETYEWSKIDAFLSNLEEYAGDAKDLEAK
PMSTKSVPEWLDSIGMAIYEPMFLANGYDEIEFINGCLDDQDLIELGILD
SGHRKKIMDSTAQLPQVKVIGENDNPIPDKIDSWLDSLKLNGYNNRFVIN
GYGSMDRVRVIWELELVTVLDISAIGHRKRMLNSLGRRPPQIKAPVSWVK
RFADADAGRVKKNVPDDSMDVAKELMNTAKDLTISRDPKKSTSSDTTQEN
TPNSPTKSVTSTPSETTADSTDGSRTTTYDDRKHKKDGWLHTPDVLMYES
VAYSAQYLGSHPVQKVKGVESTLDACSRMKVLSQNVHKMPSIVLSISIRG
IDYIDSNSKMIINQYSINNISFIAQDPDDLNVFAYITRDEMTRKNYCHVF
KAKSTRQADEIVLTLGQCFEVAYEQHMALMEIKKSQQNATTPLSSQSSSR
EPPPVPKPYAERNSNKESM Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 745..774 |
| None | No IPR available | COILS | Coil | Coil | coord: 830..850 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 855..916
e-value: 7.5E-16
score: 57.9 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 926..987
e-value: 3.5E-8
score: 33.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 516..536 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 298..362 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1234..1269 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 564..583 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 631..752 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1027..1085 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 777..815 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 432..453 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 133..281
e-value: 1.5629E-26
score: 106.314 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 64..192
e-value: 7.34504E-37
score: 135.974 |
| IPR002110 | Ankyrin repeat | PRINTS | PR01415 | ANKYRIN | coord: 253..267
score: 31.48
coord: 139..154
score: 40.79 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 138..167
e-value: 0.0029
score: 26.8
coord: 102..131
e-value: 0.49
score: 19.4
coord: 205..234
e-value: 5.2E-6
score: 36.0
coord: 171..200
e-value: 10.0
score: 15.1
coord: 69..98
e-value: 0.004
score: 26.4
coord: 237..266
e-value: 0.011
score: 24.9 |
| IPR002110 | Ankyrin repeat | PFAM | PF00023 | Ank | coord: 139..164
e-value: 3.1E-4
score: 21.0 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 138..170
score: 12.342 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 102..134
score: 11.22 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 205..237
score: 12.743 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 69..101
score: 11.167 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 237..269
score: 12.102 |
| IPR006020 | PTB/PI domain | SMART | SM00462 | PTB_9 | coord: 1098..1232
e-value: 7.8E-31
score: 118.4 |
| IPR006020 | PTB/PI domain | PFAM | PF00640 | PID | coord: 1124..1227
e-value: 3.4E-20
score: 72.4 |
| IPR006020 | PTB/PI domain | PROSITE | PS01179 | PID | coord: 1100..1225
score: 26.893 |
| IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM_4 | coord: 849..917
e-value: 5.1E-15
score: 65.9
coord: 923..991
e-value: 0.0046
score: 26.2 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF07647 | SAM_2 | coord: 853..909
e-value: 8.8E-12
score: 44.9 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF00536 | SAM_1 | coord: 929..985
e-value: 2.5E-8
score: 34.1 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 929..985
score: 10.846 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 852..917
score: 13.336 |
| IPR011993 | PH domain-like | GENE3D | 2.30.29.30 | | coord: 1059..1229
e-value: 8.8E-39
score: 132.1 |
| IPR011993 | PH domain-like | SUPERFAMILY | 50729 | PH domain-like | coord: 1083..1226 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 179..268
e-value: 2.0E-13
score: 50.6
coord: 35..126
e-value: 4.2E-12
score: 46.4 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 118..185
e-value: 5.6E-23
score: 80.7 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 25..117
e-value: 1.5E-22
score: 79.6 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 186..290
e-value: 2.4E-25
score: 88.4 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 57..281
score: 54.221 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 33..281 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 925..986 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 850..915 |
Blast
BLAST of TCONS_00020521-protein vs. Swiss-Prot (Human)
Match: ANS1B (Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Homo sapiens GN=ANKS1B PE=1 SV=2) HSP 1 Score: 281.182 bits (718), Expect = 9.934e-78 Identity = 169/455 (37.14%), Postives = 260/455 (57.14%), Query Frame = 0
Query: 824 TYEWSKIDAFLSN--------LEEYAGDAKDLEAKPMS-TKSVPEWLDSIGMAIYEPMFLANGYDEIEFI-NGCLDDQDLIELGILDSGHRKKIMDSTAQLPQVKVIGENDNPIPDKIDSWLDSLKLNGYNNRFVINGYGSMDRVRVIWELELVTVLDISAIGHRKRMLNSLGRR----PPQIKAPVSWVKRFADADAGRVKKNVPDDSMDVAKELMNTAKDLTISRDPKKSTSSDTTQENTPNSPTKSVTSTPSETTADSTDGSRTTTYDDRKHKK---DGWLHTPDVLMYESVAYSAQYLGSHPVQKVKGVESTLDACSRMKVLSQ----NVHKMPSIVLSISIRGIDYIDSNSKMIINQYSINNISFIAQDPDDLNVFAYITRDEMTRKNYCHVFKAKSTRQADEIVLTLGQCFEVAYEQHMALMEIKKSQQNATTPLSSQSSSREPPPVPK 1257
T EW +ID +S+ L+E G+ +P ++V +WL+SIG+ YE +ANG+D ++F+ + ++DQDL+E+GIL+SGHR++I+ + LP+++ IG +D P + WLDS++L Y F+INGY SMD ++ IWE+EL+ VL I+ IGHRKR+L SLG R PPQ K P S R + P S +++ T L + + + EN + +S T D + S T + W H P+ L+++S Y A YLGS +++++G EST DAC++M+ Q + K+P+I+LS+S +G+ +ID+ +K II ++ I NIS AQDP+DL+ FAYIT+D + +YCHVF A A EI+LTLGQ FEVAY+ +AL + +K ++T P S ++ +P P P+
Sbjct: 777 TSEWEEIDKIMSSIDVGINNELKEMNGET----TRPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIG-HDGYHPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQ-KPPRSITLREPSGN-----HTPPQLSPSLSQSTYTTGGSLDVPHIIMQGDARRRRNENYFDDIPRSKLERQMAQTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQ--LAL-QARKGGHSSTLPESFENKPSKPIPKPR 1217 HSP 2 Score: 250.366 bits (638), Expect = 9.494e-68 Identity = 140/319 (43.89%), Postives = 189/319 (59.25%), Query Frame = 0
Query: 27 MGKESEVLQAAQEGNLSKLESLFTQ---------------KRFGGLLKGPNINGRDSSGCTALHLAALYGNSDACVFLLHNDASANVPDNAGSFPLHLAAFNGHYEIAQTLISRGPSRAQVNEANMAGDTALHVASQYGHEKVVKVLLGNYADASFRNSKDESPLDLAAQYGRLLTVELFLNYDRTLCYKSPVHRHSPLHLAARNGHADVVRALLNYGMPVNATCDMGTALHCAATYGKTAVAKLLIERGIDIEIEDDNGQKVLDILVKNPSQTSQEITGLIYAKPASSSDAELSRSPATSYSGQQFEI---VEHPKRK 327
MGK+ E+L+AA+ GN++ +E L + + +GPN+N DSSG TALH AAL G+ D + LL +AS NV DN G FP+HLAA+ G EI + LI GPS ++VNE N +TALH A+QYGH +VV VLL D + RNSK E+PLDLAA YGRL V++ ++ L +H+PLHLAARNGH VV+ LL GM V+ + G+ALH AA +GK V ++L+E GID I+D G+ VLDIL ++PSQ S +I L+ + + P + Q+ I VE P +K
Sbjct: 1 MGKDQELLEAARTGNVALVEKLLSGRKGGILGGGSGPLPLSNLLSIWRGPNVNCTDSSGYTALHHAALNGHKDIVLKLLQYEASTNVADNKGYFPIHLAAWKGDVEIVKILIHHGPSHSRVNEQNNENETALHCAAQYGHSEVVAVLLEELTDPTIRNSKLETPLDLAALYGRLRVVKMIISAHPNL-MSCNTRKHTPLHLAARNGHKAVVQVLLEAGMDVSCQTEKGSALHEAALFGKVDVVRVLLETGIDANIKDSLGRTVLDILKEHPSQKSLQIATLLQEYLEGVGRSTVLEEPVQEDATQETHISSPVESPSQK 318
The following BLAST results are available for this feature:
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