TCONS_00019163-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00019163-protein
Unique Name	TCONS_00019163-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	487

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00019163-protein ID=TCONS_00019163-protein|Name=TCONS_00019163-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
MNKQPAFLLPVEKCQLCLKKKHQFTCNVCVLTGNFSKSIRSLENYEEGGG
RNSYLSSQQTSFNNKQKRLHIVRNVKNEFQERLDEKLEKQANYNKKVTQL
IILRNRIETLKCVLQESKSQNEREKEENNKFAESLAEKQKLVKRLRLKSD
KLKNDYHLQEKKIKLHRYKTKLESKRESLKEIRISHINALVNNIFPISER
TIFPTLGTSPRGISKYNADIGSDVVSESLSKSPEFDLEEATRTIHVEGKW
ISLKSEERETTIVDAGMPNSGDFIKYFVWLKSYRSEPRSTESNIILHDNE
ILNVPASLIYSAQLTDGMAFFLSINLPHQIEYINFGLLQVSRKKLVRTID
RLAENVMYLCCSQGIDENQLEPNAILKNLKTMIETRPESLGRTIPFEAIE
FEPNECPFDSDSSAEELNFDTDSDSADGNTEEWDRLHDLPEPAMDPHYHS
TSPSFDASRDRSLSSSASGLVTSAAASVASALWSWKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010753	XLOC_010753	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00019163	TCONS_00019163	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018791	UV_resistance/autophagy_Atg14

Vocabulary: **Biological Process**
Term	Definition
GO:0010508	positive regulation of autophagy

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010508	positive regulation of autophagy

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	COILS	Coil	Coil	coord: 107..178
None	No IPR available	GENE3D	3.40.50.300		coord: 27..432 e-value: 9.5E-4 score: 18.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 405..467
IPR018791	UV radiation resistance protein/autophagy-related protein 14	PFAM	PF10186	Atg14	coord: 14..379 e-value: 1.2E-27 score: 96.7

Blast

[Close]

BLAST of TCONS_00019163-protein vs. Swiss-Prot (Human)
Match: BAKOR (Beclin 1-associated autophagy-related key regulator OS=Homo sapiens GN=ATG14 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.273e-45
Identity = 142/498 (28.51%), Postives = 241/498 (48.39%), Query Frame = 0

Query:    6 AFLLPVEKCQLCLKKKHQFTCNVCVLTGNFSKSIRSLENYEEGGGRNSYLSSQQTSFNNKQKRLHIVRNVKNEFQERLDEKLEKQANYNKKVTQLIILRNRIETLKCVLQESKSQNEREKEENNKFAESLAEKQKLVKRLRLKSDKLKNDYHLQEKKIKLHRYKTKL-----------ESKRESLKEIRISHINALVNNIFPISERTIFPTLGTSPRGISKYNADIGSDVVSESLSKSPEFDLEEATRTIHVEGKWISLKSEERETTIVDAG----MPNSGDFIKYFVWLKSYRSEPRSTESNIILHDNEILNVPASLIYSAQLTDGMAFFLSINLPHQIEYINFGLLQVSRKKLVRTIDRLAENVMYLCCSQGIDENQLEPNAILKNLKTMIETRPESLGRTIPF-------EAIEFEPNECPFDSDSSAEELNFDTDSD-SADGNTEEWDRLHDLPEPAMDPHYHSTSPSFDASRDRSLSSSASGLVTSAAASVAS 480
               + VE+C LC   + + TC  CV +G+F         Y +G  R  ++        +K++RL  +++ + EFQ+ + + +E +   ++   +++  + RIE LK  + +   + E+  E   K  E   + QKL  R +            QEKK K+ R+  KL            S  E L  +R SHI  L + IFPI E      + T  R  +  +++  S + S ++SK     L EA RT ++ G+W+       +T+I   G    +PN+GD+  Y+ W++    E ++T+   +   N    + A+L Y+ QL + ++  L +NLP ++    F    +S++K  R + +L  N++YLC SQ ++ +QL+P   L+NL  ++    E LGR+ PF       E++EF       +SD S +E   D ++D   D       R  D+P  +++    S S S  AS   + SSSA G+++SAAASV S
Sbjct:   35 GLYVAVERCPLCNTTRRRLTCAKCVQSGDFV--------YFDGRDRERFI--------DKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKE---KNQKLYSRAQ----------RHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEE------VKTGVRDPADVSSESDSAMTSSTVSK-----LAEARRTTYLSGRWV-CDDHNGDTSISITGPWISLPNNGDYSAYYSWVE----EKKTTQGPDMEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNANILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVAGESDESGDERVSDEETDLGTDWENLPSPRFCDIPSQSVEV---SQSQSTQASPPIA-SSSAGGMISSAAASVTS 483

The following BLAST results are available for this feature:

BLAST of TCONS_00019163-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00019163-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BAKOR	1.273e-45	28.51	Beclin 1-associated autophagy-related key regulato...	[more]

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TCONS_00019163-protein (polypeptide) - C. hemisphaerica