TCONS_00015619-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015619-protein
Unique NameTCONS_00015619-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length827

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015619-protein ID=TCONS_00015619-protein|Name=TCONS_00015619-protein|organism=Clytia hemisphaerica|type=polypeptide|length=827bp
MGPHGWGRMAMNMADQAVDEVYEDQEKDPSVHSFTLSTGCSWPNAVKWSF
DGRIAILTDNVIHVLSFNNSTKRRQPGEEFGLTFDSSVIPITPFQCGDVG
ISPDEFGNGGFKERQQFVLDYGTVRDRSVYTDPDCYSNLHWSPLGCTSDG
RSILATQSANGEIYIHTLSNMLGKWEPTFPVTKHLQDYLKQNAWFTGGIE
EKCTEKDLQYEMQEYCRRKRLLYTVTFAWCPLVWTCNDCLVNQHPENMYY
TNYFINFASCCHGKYMFCTASRTGHLFLWNLTYHKRHASKNDLEVAFVYD
TKTTWPFSSSWFQYSTNDVLIAVGYTQGTVTLLHFRVNYNTEGNGQQTIS
FVDKHNIWDDIDEISVTNLAFIRTKLGRLNLIAIKGTEILIFRELSIEPL
RSVSCEQAPTCHSSPIVSLQTVKDRFIVTASHGATQYVDIEDEINPFCDS
NILRGFRCCGLAADPSLCMFVRVSCPSRLLLLQSSFVKQMEVCFLPFLST
EDIAQLLLNEEIDMDIIVCEYFLISTAENFILPNVLHPFCEAPESYDLST
RKLQIYLYFNRVRYMQTTGMRANALTNEEVKKTWTSNVNKIEDEVIKKIN
KAIEIQFFKEMLCKFLQLHENEWLVLTDEGSLSLRLICDFILRYDTTDEG
RDLAKRAFIAFKDDECSEMVSNIHSDEDVTRGKNAVSSLDEQETLHQSKD
VPGSETSSKANEILDKNYETSHLINTELSVESTLQQNLWEQFREHCPYCG
ADICLTGVQQEKCRNGHKYVRCALTLRACKLKTYRVCIGCDRKVLSKCLS
GKLDVESILLNIDVCPFCGCRFIEYHR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008714XLOC_008714Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015619TCONS_00015619Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
IPR024761TFIIIC_delta_N
IPR024764TFIIIC_Znf
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 227..727
e-value: 8.5E-8
score: 30.8
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 24..226
e-value: 1.2E-5
score: 24.1
IPR024761Transcription factor IIIC, 90kDa subunit, N-terminalPFAMPF12657TFIIIC_deltacoord: 42..229
e-value: 1.7E-14
score: 54.0
IPR024764Transcription factor IIIC, putative zinc-fingerPFAMPF12660zf-TFIIICcoord: 737..822
e-value: 1.1E-11
score: 44.4
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 132..180
coord: 245..432
coord: 36..70

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015619-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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