TCONS_00015175-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015175-protein
Unique NameTCONS_00015175-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1025

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015175-protein ID=TCONS_00015175-protein|Name=TCONS_00015175-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1025bp
MASRLAVQSAWKIPGRFSSRFNVQKLRTSVQNSPRYISTTAHKFATQEED
DLFSIKEILPPQDAFAKRHIGPRKQYRNEMLRILNYEDIETFVEATLPSS
IILKNDLDLDPPKTEEECLRRLREFGKLNKVWRSYIGLGYYNTIVPPTIL
RNLLENPGWTTQYTPYQAEISQGRLESLLNYQTMVSDLTALPFANSSLLD
EGTAAAEALGLSFRVNKKKKFFIDKNCHPQTIALVETRASTIANASMEII
VGDYKEFDFSNKDVSGVLFQYPDTNGHIEDFTELVEKAHEGGALACCATD
LLACAMLKPPGEFGCDVALGNSQRFGVPLGYGGPHAAFFSVTDNLKRFIP
GRVVGVSKDVHGNPCYRLALQTREQHIRRDKATSNICTAQALLANMSGMY
AVYHGPEGIANISKRVHNAALILAEGLKVGGYTLASESFFDTVKVVGIKD
KQWCIDRAASKEINLREFPDGSLGISMDETIQEKDLDDLFWVFSCGETAA
HIASEMSSPPQQSILSSDLKRKTSFLDHPVFNSYQSETKIVRYMKMLENK
DLSLVHAMIALGSCTMKLNATSEMMAITWPKFTNIHPFVPKDQAEGYYQL
FKELEDDLSEITGFDATSLQPNSGAQGEFAGLMTIKAYLKSIGQEHRNIC
IIPKSAHGTNPASAAMAGFKIIPVNTDKVGGIDYNDLASKVEKHRDNLAA
IMITYPSTSGVFEPGIRDMCRLIHENGGQVYLDGANMNAQVGLCRPGDYG
ADVCHLNLHKTFCIPHGGGGPGMGPICVKKHLQPFLPTHPIVPPVGTDAE
GAQPFGTIAAAPYGSAAVLSISWAYIKMMGPKGLTKATQIAILNANYMLH
RLEGHFELRFRGPNGNCAHEFIVDCKEFKKSANIEVLDIAKRLQDYGFHA
PTMAWPISTALMIEPTESETKAECDRLVDAMISIRQEIRDIEEGRMDKLN
NPLKNSPHTQAVLMEENWDKPYSREVAAFPAPWSLRSKFWPTIGRVDDVH
GDSHLICSCPPMESYEYDQKQGGLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008501XLOC_008501Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015175TCONS_00015175Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003437GcvP
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015422PyrdxlP-dep_Trfase_sub2
IPR020581GDC_P
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006544glycine metabolic process
GO:0006546glycine catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004375glycine dehydrogenase (decarboxylating) activity
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006546 glycine catabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004375 glycine dehydrogenase (decarboxylating) activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003437Glycine dehydrogenase (decarboxylating)TIGRFAMTIGR00461TIGR00461coord: 68..1009
e-value: 0.0
score: 1378.5
IPR003437Glycine dehydrogenase (decarboxylating)HAMAPMF_00711GcvPcoord: 59..1015
score: 23.118
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 571..829
e-value: 3.4E-38
score: 130.9
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 147..394
e-value: 1.1E-27
score: 96.5
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 395..495
e-value: 6.6E-24
score: 84.1
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 830..964
e-value: 2.6E-43
score: 147.1
IPR020581Glycine cleavage system P proteinPFAMPF02347GDC-Pcoord: 532..802
e-value: 6.8E-8
score: 31.7
coord: 67..493
e-value: 3.3E-172
score: 573.1
IPR020581Glycine cleavage system P proteinCDDcd00613GDC-Pcoord: 115..493
e-value: 2.05866E-159
score: 477.879
IPR020581Glycine cleavage system P proteinCDDcd00613GDC-Pcoord: 537..931
e-value: 7.29023E-146
score: 442.826
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 68..489
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 535..945
coord: 988..1011

Blast
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BLAST of TCONS_00015175-protein vs. Swiss-Prot (Human)
Match: GCSP (Glycine dehydrogenase (decarboxylating), mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2)

HSP 1 Score: 1271.14 bits (3288), Expect = 0.000e+0
Identity = 619/966 (64.08%), Postives = 747/966 (77.33%), Query Frame = 0 
Query:   55 IKEILPPQDAFAKRHIGPRKQYRNEMLRILNYEDIETFVEATLPSSIILKNDLDLDPPKTEEECLRRLREFGKLNKVWRSYIGLGYYNTIVPPTILRNLLENPGWTTQYTPYQAEISQGRLESLLNYQTMVSDLTALPFANSSLLDEGTAAAEALGLSFRVNKKKKFFIDKNCHPQTIALVETRASTIANASMEIIVGDYK---EFDFSNKDVSGVLFQYPDTNGHIEDFTELVEKAHEGGALACCATDLLACAMLKPPGEFGCDVALGNSQRFGVPLGYGGPHAAFFSVTDNLKRFIPGRVVGVSKDVHGNPCYRLALQTREQHIRRDKATSNICTAQALLANMSGMYAVYHGPEGIANISKRVHNAALILAEGLKVGGYTLASESFFDTVKVVGIKDKQWCIDRAASKEINLREFPDGSLGISMDETIQEKDLDDLFWVFSCGETAAHIASEMSSPPQQSILSSDLKRKTSFLDHPVFNSYQSETKIVRYMKMLENKDLSLVHAMIALGSCTMKLNATSEMMAITWPKFTNIHPFVPKDQAEGYYQLFKELEDDLSEITGFDATSLQPNSGAQGEFAGLMTIKAYLKSIGQEHRNICIIPKSAHGTNPASAAMAGFKIIPVNTDKVGGIDYNDLASKVEKHRDNLAAIMITYPSTSGVFEPGIRDMCRLIHENGGQVYLDGANMNAQVGLCRPGDYGADVCHLNLHKTFCIPHGGGGPGMGPICVKKHLQPFLPTHPIVPPVGTDAEGAQPFGTIAAAPYGSAAVLSISWAYIKMMGPKGLTKATQIAILNANYMLHRLEGHFELRFRGPNGNCAHEFIVDCKEFKKSANIEVLDIAKRLQDYGFHAPTMAWPISTALMIEPTESETKAECDRLVDAMISIRQEIRDIEEGRMDKLNNPLKNSPHTQAVLMEENWDKPYSREVAAFPAPW-SLRSKFWPTIGRVDDVHGDSHLICSCPPMESYE 1016
            ++ +LP  D FA+RHIGP  + + EML+ L    I+  +E T+P++I LK  L ++ P  E E L  L      N++WRSYIG+GYYN  VP TILRNLLEN GW TQYTPYQ E+SQGRLESLLNYQTMV D+T L  AN+SLLDEGTAAAEAL L +R NK++KF +D  CHPQTIA+V+TRA          ++ + K   E DFS KDVSGVLFQYPDT G +EDFTELVE+AH+ G+LACCATDLLA  +L+PPGEFG D+ALG+SQRFGVPLGYGGPHAAFF+V ++L R +PGR+VGV++D  G   YRLALQTREQHIRRDKATSNICTAQALLANM+ M+A+YHG  G+ +I++RVHNA LIL+EGLK  G+ L  + FFDT+K+      +  + RAA ++IN R F DG+LGIS+DET+ EKDLDDL W+F C E++A + +E      + I  S  KR + FL H VFNSY SET IVRYMK LENKD+SLVH+MI LGSCTMKLN++SE+  ITW +F NIHPFVP DQA+GY QLF+ELE DL E+TG+D    QPNSGAQGE+AGL TI+AYL   G+ HR +C+IPKSAHGTNPASA MAG KI PV  DK G ID   L + V+KH++NLAAIMITYPST+GVFE  I D+C LIH++GGQVYLDGANMNAQVG+CRPGD+G+DV HLNLHKTFCIPHGGGGPGMGPI VKKHL PFLP HP++       E A P GT++AAP+GS+++L ISWAYIKMMG KGL +AT+ AILNANYM  RLE H+ + FRG  G   HEFI+D + FKKSANIE +D+AKRLQDYGFHAPTM+WP++  LM+EPTESE KAE DR  DAMISIRQEI DIEEGR+D   NPLK SPH+   +   +WD+PYSREVAAFP P+    +KFWPTI R+DD++GD HL+C+CPPME YE
Sbjct:   53 LERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTG------VLTELKLPCEMDFSGKDVSGVLFQYPDTEGKVEDFTELVERAHQSGSLACCATDLLALCILRPPGEFGVDIALGSSQRFGVPLGYGGPHAAFFAVRESLVRMMPGRMVGVTRDATGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMFAIYHGSHGLEHIARRVHNATLILSEGLKRAGHQLQHDLFFDTLKIQCGCSVKEVLGRAAQRQINFRLFEDGTLGISLDETVNEKDLDDLLWIFGC-ESSAELVAESMGEECRGIPGSVFKRTSPFLTHQVFNSYHSETNIVRYMKKLENKDISLVHSMIPLGSCTMKLNSSSELAPITWKEFANIHPFVPLDQAQGYQQLFRELEKDLCELTGYDQVCFQPNSGAQGEYAGLATIRAYLNQKGEGHRTVCLIPKSAHGTNPASAHMAGMKIQPVEVDKYGNIDAVHLKAMVDKHKENLAAIMITYPSTNGVFEENISDVCDLIHQHGGQVYLDGANMNAQVGICRPGDFGSDVSHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPNHPVISL--KRNEDACPVGTVSAAPWGSSSILPISWAYIKMMGGKGLKQATETAILNANYMAKRLETHYRILFRGARGYVGHEFILDTRPFKKSANIEAVDVAKRLQDYGFHAPTMSWPVAGTLMVEPTESEDKAELDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSHWDRPYSREVAAFPLPFVKPENKFWPTIARIDDIYGDQHLVCTCPPMEVYE 1009
The following BLAST results are available for this feature:
BLAST of TCONS_00015175-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GCSP0.000e+064.08Glycine dehydrogenase (decarboxylating), mitochond... [more]
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