TCONS_00015062-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015062-protein
Unique NameTCONS_00015062-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length271

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015062-protein ID=TCONS_00015062-protein|Name=TCONS_00015062-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
VNYKKKQKKMDRRTSCLLFRCVRPHHFLVLMGAFTILSFILGYAISVSLD
KVNYLFPYISDTGTTTPASSYFGLCLNLASVFAAISMYFRHSFLEKQEVL
TTVRLHMLNDVTLLIGGFSAFGIMLVANFQETSVLTIHLIGAFMTFALGN
VYCWINTYISHVIRNETGSTQGMIALRGILSAISTFTFLLTMIGASMAKN
ESGKTINLHWTSDQKGYKLHLMSTFSEWIMGISFVIFFLTFVGEFRRMKA
TLPIAFSNHQQRMPFEENVNV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008427XLOC_008427Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015062TCONS_00015062Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019402Frag1/DRAM/Sfk1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019402Frag1/DRAM/Sfk1PFAMPF10277Frag1coord: 29..246
e-value: 8.5E-33
score: 113.6

Blast
[Close]
BLAST of TCONS_00015062-protein vs. Swiss-Prot (Human)
Match: DRAM1 (DNA damage-regulated autophagy modulator protein 1 OS=Homo sapiens GN=DRAM1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.025e-33
Identity = 69/211 (32.70%), Postives = 111/211 (52.61%), Query Frame = 0 
Query:   38 SFILGYAISVSLDKVNYLFPYISDTGTTTPASSYFGLCLNLASVFAAISMYFRHSFLEKQEVLTTVRLHMLNDVTLLIGGFSAFGIMLVANFQETSVLTIHLIGAFMTFALGNVYCWINTYISHVIRNETGSTQGMIALRGILSAISTFTFLLTMIGASMAKNESGKTINLHWTSDQKGYKLHLMSTFSEWIMGISFVIFFLTFVGEFRRM 248
            +FI+ Y ++V    VN   PYISDTGTT P S  FG  +N ++   A +MY R+  ++KQ         + N V+L++G    FG+ +VANFQE +V  +H  GA + F  G VY  + + IS+    +  S      +R ++SA+S    +  ++ AS+          L W   +K Y  H++S   EW +   F+ +FLTF+ +F+ +
Sbjct:   22 AFIISYVVAVLSGHVNPFLPYISDTGTTPPESGIFGFMINFSAFLGAATMYTRYKIVQKQNQTCYFSTPVFNLVSLVLGLVGCFGMGIVANFQELAVPVVHDGGALLAFVCGVVYTLLQSIISYKSCPQWNSLS-TCHIRMVISAVSCAAVIPMIVCASLI-----SITKLEWNPREKDYVYHVVSAICEWTVAFGFIFYFLTFIQDFQSV 226
The following BLAST results are available for this feature:
BLAST of TCONS_00015062-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DRAM11.025e-3332.70DNA damage-regulated autophagy modulator protein 1... [more]
back to top