TCONS_00013517-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013517-protein
Unique NameTCONS_00013517-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length289

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013517-protein ID=TCONS_00013517-protein|Name=TCONS_00013517-protein|organism=Clytia hemisphaerica|type=polypeptide|length=289bp
EQTNNFVNENEKEQKKVTNRRRFHKKIKMAANDMLSELFKFHAQIIIVLT
CSLSILGSILIITTEKPSLAIRLIHPWFHLISWLIPLFINLLALFLRKLG
DNYDSASAGWCWIRMDDAHATLWMFLDGKGLELLTYIVIIVLYTKLKWHL
QRKIRKFERSESFNENLTRFSLKAAKQVDKKIILVPIVYILLRIWGTVRF
FMFIAGTDDKKYRVVADVFIVLQLFGDNLVGFANCVLFCFLTVKIRRHLK
SSLSRMYIKCRTCYRPDEFSYMDISSDGELSEDMSLSST
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007547XLOC_007547Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013517TCONS_00013517Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017981GPCR_2-like
Vocabulary: Molecular Function
TermDefinition
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007166cell surface receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1070.10coord: 72..257
e-value: 5.4E-15
score: 54.6
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 78..265
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 77..242
score: 12.062

Blast
[Close]
BLAST of TCONS_00013517-protein vs. Swiss-Prot (Human)
Match: GP157 (G-protein coupled receptor 157 OS=Homo sapiens GN=GPR157 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.752e-27
Identity = 60/174 (34.48%), Postives = 95/174 (54.60%), Query Frame = 0 
Query:   78 FHLISWLIPLFINLLALFLRKLGDNYDSASAGWCWIRMDDAHATLWMFLDGKGLELLTYIVIIVLYTKLKWHLQRKIRKFERSESFNENLTRFSLKAAKQVDKKIILVPIVYILLRIWGTVRFFMFIAGTDDKKYRVVADVFIVLQLFGDNLVGFANCVLFCFLTVKIRRHLKS 251
            FH++SW +PL I + A+ L+K+G +    S GWCWI ++     LWM L GK  E+L Y+++ +LY  ++ H+ R                R  L+ +   DKK++L+P+++I LR+W TVRF + + G+      V   V +VL   G+   G ANC++F   T  +R  L S
Sbjct:  124 FHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTGKLWEMLAYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRL-LRHSSMADKKLVLIPLIFIGLRVWSTVRFVLTLCGSPA----VQTPVLVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFS 292
The following BLAST results are available for this feature:
BLAST of TCONS_00013517-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GP1572.752e-2734.48G-protein coupled receptor 157 OS=Homo sapiens GN=... [more]
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