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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00012734-protein ID=TCONS_00012734-protein|Name=TCONS_00012734-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1214bp
MSRDQQHEEEGEKEEIENDSFVDVSGRTLSFIKTGGSPPRASPTRKRRSA
LSNIKHMKFVRQKSSSIEKEDEPNDTDKSTDQMPIIKSSSFRTHKPSPAP
RYAIRTYSHTLNQSSRVCRADSFGASAVPRRLRSITNVNSDGEQVKTRRI
STPELVNRRQMLRQKSMESLEQLKTFKGAIASRQQIDNSILSVNSNLDES
RASTTAPNNVRPTKTITNFLRKISINSKSKHPVPSSPPKNRLLDDRETLI
SERDKVLEEWSESAKKCEELIDELDITLTELMAVKDDRDKQQERLNQLLQ
FYQSNLDEKDLEIEDLQTKIIELTELRFTLKKERDDYLKQRTDEAKISYQ
LARQIHEMMTEIEESNMEIEETKVICNQLHSQVSHLVTNIEKQDQLTMLI
LDTMVPINNNPHPSTPDDGPNKAVLNDLTGPDDVTKERDQLRNELDRIRK
LLEMSSKNKHMSINFGDDNVAKKLIRTGSLNENVGFGMSETDNDNVFITD
QDKILGSNKALNKLHNQYEQYEDIAICIDTFDSRTGLKLDNAYDEPRVMV
CDVTKQLEDKWNIRKSDRILSVNGTSVHQGDKKVVEKLFKETVGRTISLV
LRREKMCVMKELTDVEVNYGKQNDLGLQFQLSVKYINTENRDLFTGLENI
HNGDVITKINSQDIDSILSAVIKKLAKKSNNKITYRIRRGDGTSAPVDSL
PYIPRQNKSKQVSQSKSFSSITSSITPRKSTNESSAARNLINDISSKLPF
RANSDAASTVPRQQNGSRVPTFRASFHGFSNIPPHQPPPPRFTKQKTSNL
PSITIETPTNTEKENDKRDRLYSPERSNSFENFTQKIFADSNTPFDSANN
KMNNFPTNENSENIEPPHRHSLYRPSPRIRRIEDEFAVTDRATRQYKSKS
LYLEVLNRRSFAAPITLDDPPEPHLTGDINNRISLHADTLSSQQTLRNIS
GYATLPRKYKKKPSKKKATKSIRLAKSEDEKLGIKICGGNKVGIFISDIL
PGSAAAHSNLKVGDRIINMNSLDLTRATLDFATRVMMSNIKSTKVRMQLQ
EHENYLDVVQNSYAESLYVRTLHSYNATNLNEMSFKAGDILHITDTRYNF
DEDNMTWTWYGARKVSSSKQTEGEIPAIEGFDGTKEVTEKEAHAHMSTSR
NPLRRLSKSAQDLKRRFFGKKSSLRRRNTAGSSKIERAHHNNGIEDPVKR
SSFYEILLEDPIRI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 239..277 |
| None | No IPR available | COILS | Coil | Coil | coord: 292..333 |
| None | No IPR available | COILS | Coil | Coil | coord: 438..458 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 541..639
e-value: 8.8E-7
score: 28.6 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 646..740
e-value: 2.7E-4
score: 20.4 |
| None | No IPR available | GENE3D | 1.20.1170.10 | | coord: 133..525
e-value: 4.4E-7
score: 28.6 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 954..1047
e-value: 2.4E-16
score: 59.3 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 1048..1198
e-value: 1.6E-9
score: 37.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 802..824 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 408..437 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1173..1194 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..100 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 694..736 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 972..1050
e-value: 4.79145E-14
score: 68.7474 |
| None | No IPR available | CDD | cd00136 | PDZ | coord: 543..602
e-value: 1.64422E-4
score: 39.9813 |
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 623..691
e-value: 16.0
score: 1.1
coord: 533..605
e-value: 0.47
score: 15.7
coord: 980..1053
e-value: 1.3E-10
score: 51.2 |
| IPR001478 | PDZ domain | PFAM | PF00595 | PDZ | coord: 972..1049
e-value: 3.2E-12
score: 46.5 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 614..691
score: 8.506 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 971..1051
score: 16.345 |
| IPR001478 | PDZ domain | SUPERFAMILY | 50156 | PDZ domain-like | coord: 525..615 |
| IPR001478 | PDZ domain | SUPERFAMILY | 50156 | PDZ domain-like | coord: 940..1052 |
| IPR011511 | Variant SH3 domain | PFAM | PF07653 | SH3_2 | coord: 1068..1113
e-value: 2.7E-5
score: 23.7 |
| IPR001452 | SH3 domain | PROSITE | PS50002 | SH3 | coord: 1064..1127
score: 10.174 |
| IPR001452 | SH3 domain | SUPERFAMILY | 50044 | SH3-domain | coord: 1066..1131 |
Blast
The following BLAST results are available for this feature:
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