TCONS_00012506-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012506-protein
Unique Name	TCONS_00012506-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	326

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012506-protein ID=TCONS_00012506-protein|Name=TCONS_00012506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MMKGLILLGLLGLSLAHLEVIEDKSWHLWKGVHNKYYPNMFVEKIRYNIW
QDNSNRIENFNKLNQGYSLRMNHFGDLTNTEYRQHMNGYKMRSTKHSEAA
TFLSPTNVKVPDTVDWRQQGFVTPVKNQGQCGSCWAFSTTGSLEGQHFKK
TGKLVSLSEQNLVDCSSKEGNMGCNGGLMDQAFAYIKTNGGIDTEESYPY
KGADGQCKFDAKNIGANDTGFVDVKSGDEDALKTAVATVGPISVAIDASH
FSFQFYHSGVYNSWLCSSTRLDHGVLAIGYGTYQGKDYWLVKNSWGTGWG
LKGYIMMSRNKKNQCGIATQASYPLV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007029	XLOC_007029	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012506	TCONS_00012506	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000668	Peptidase_C1A_C
IPR013201	Prot_inhib_I29
IPR025660	Pept_his_AS
IPR000169	Pept_cys_AS
IPR025661	Pept_asp_AS

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008234	cysteine-type peptidase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000668	Peptidase C1A, papain C-terminal	PRINTS	PR00705	PAPAIN	coord: 288..294 score: 75.76 coord: 273..283 score: 53.83 coord: 128..143 score: 65.72
IPR000668	Peptidase C1A, papain C-terminal	SMART	SM00645	pept_c1	coord: 110..325 e-value: 9.9E-127 score: 437.0
IPR000668	Peptidase C1A, papain C-terminal	PFAM	PF00112	Peptidase_C1	coord: 110..324 e-value: 7.5E-88 score: 294.2
IPR013201	Cathepsin propeptide inhibitor domain (I29)	SMART	SM00848	Inhibitor_I29_2	coord: 26..82 e-value: 1.3E-14 score: 64.5
IPR013201	Cathepsin propeptide inhibitor domain (I29)	PFAM	PF08246	Inhibitor_I29	coord: 26..82 e-value: 1.6E-10 score: 41.2
None	No IPR available	GENE3D	3.90.70.10		coord: 22..326 e-value: 1.6E-116 score: 388.7
None	No IPR available	CDD	cd02248	Peptidase_C1A	coord: 111..324 e-value: 7.01284E-122 score: 350.771
None	No IPR available	SUPERFAMILY	54001	Cysteine proteinases	coord: 23..325
IPR025660	Cysteine peptidase, histidine active site	PROSITE	PS00639	THIOL_PROTEASE_HIS	coord: 271..281
IPR000169	Cysteine peptidase, cysteine active site	PROSITE	PS00139	THIOL_PROTEASE_CYS	coord: 128..139
IPR025661	Cysteine peptidase, asparagine active site	PROSITE	PS00640	THIOL_PROTEASE_ASN	coord: 288..307

Blast

[Close]

BLAST of TCONS_00012506-protein vs. Swiss-Prot (Human)
Match: CATL1 (Cathepsin L1 OS=Homo sapiens GN=CTSL PE=1 SV=2)

HSP 1 Score: 345.51 bits (885), Expect = 7.211e-119
Identity = 173/337 (51.34%), Postives = 222/337 (65.88%), Query Frame = 0

Query:    2 MKGLILLGLLGLSLAHLEVIEDKS----WHLWKGVHNKYYPNMFVEKIRYNIWQDNSNRIE----NFNKLNQGYSLRMNHFGDLTNTEYRQHMNGYKMRSTKHSEAATFLSPTNVKVPDTVDWRQQGFVTPVKNQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSSKEGNMGCNGGLMDQAFAYIKTNGGIDTEESYPYKGADGQCKFDAKNIGANDTGFVDVKSGDEDALKTAVATVGPISVAIDASHFSFQFYHSGVYNSWLCSSTRLDHGVLAIGYG----TYQGKDYWLVKNSWGTGWGLKGYIMMSRNKKNQCGIATQASYPLV 326
            M   ++L    L +A   +  D S    W  WK +HN+ Y  M  E  R  +W+ N   IE     + +    +++ MN FGD+T+ E+RQ MNG++ R  K  +   F  P   + P +VDWR++G+VTPVKNQGQCGSCWAFS TG+LEGQ F+KTG+L+SLSEQNLVDCS  +GN GCNGGLMD AF Y++ NGG+D+EESYPY+  +  CK++ K   ANDTGFVD+    E AL  AVATVGPISVAIDA H SF FY  G+Y    CSS  +DHGVL +GYG          YWLVKNSWG  WG+ GY+ M+++++N CGIA+ ASYP V
Sbjct:    1 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNR--KPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333

The following BLAST results are available for this feature:

BLAST of TCONS_00012506-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012506-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CATL1	7.211e-119	51.34	Cathepsin L1 OS=Homo sapiens GN=CTSL PE=1 SV=2	[more]

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TCONS_00012506-protein (polypeptide) - C. hemisphaerica