TCONS_00012382-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012382-protein
Unique NameTCONS_00012382-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length872

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012382-protein ID=TCONS_00012382-protein|Name=TCONS_00012382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=872bp
MCNCCGGDSYHPKNKVVPDEVGQAQYGRTNGLSCPLHPLQLIGWFFITLF
GITHFGILVHYLPSEWVPFGIIFPACGYVIHLFYHFFALILDPADPAVRR
KGSFLRKIFDRSKHTHVIENSFCYICQTQVSSRSKHCSACNKCVSDFDHH
CKWLNNCVGGRNYKLFLGCCISAILTALLMFVIDFYLMIAYYTDQENVLK
RAVLNTWQLFVPVCKEAYIIFVIVNGLLLLVAMLLIGHLLLFHCYLLCKN
LSTYDYIMQSRTATSASKASLPSDVETGDEPAPPVLRPLSSQSHTYQEVD
DVRKEKSSYEMTHIEEDKTYVKIIDKTKQPSTEQPLPVVEEIVTNQNVTV
VETAIDVADNHQQPQQEEERPPSSTSSAHKKKKRKKERSSSKIGLIRTDD
DEDNDSLSSARSHNSLRSAEEERYIQMQNERVMQNFQVMGASTPNSERES
KSHPVPLSEESAYENMKETTRIESVASRPRSPSPKQSQRISFANQQNDYV
MRVADKRASNSSLSTLALQDHDEVGQLIAVSPKIPLSPHREESFESKTSS
KRSSAPSATKLIEVSSKSSGIEADADIIDEEDETKDRPDSPAISLSAVRP
LSGRPESAKGSDISRISLSKGGRLQSPRVSVVSEITNITLASEKFGTETE
LTGAVPVDEQRPQDLVLKDAFSESATLVFEDEFANDNDQNIDFLQQSILA
TEERQRASKSPPRDIPAEEKKAQDSGMLSDADSQKLGKYVDAFKRRRASD
QYSFGSDSAESENGVPLATLNEDSDSYELLDTLKRVKKLSDAFPNAIDQE
KLKKRSLPTPNFKKQESMSELSVVEYNRKKKLKKKRPGSSTSGGKHLPPI
RGRRPLAGVEEEMHASDTDDMI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006962XLOC_006962Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012382TCONS_00012382Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 118..259
e-value: 2.7E-31
score: 108.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..773
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..623
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 702..733
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 799..872
NoneNo IPR availablePROSITEPS50216DHHCcoord: 121..167
score: 23.1

Blast
[Close]
BLAST of TCONS_00012382-protein vs. Swiss-Prot (Human)
Match: ZDHC1 (Probable palmitoyltransferase ZDHHC1 OS=Homo sapiens GN=ZDHHC1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 6.537e-54
Identity = 120/297 (40.40%), Postives = 158/297 (53.20%), Query Frame = 0 
Query:   23 QAQYGRTNGLSCPLHPLQLIGWFFITLFGITHFGILVHYLPSEWVPFGIIFPACGYVIHLFYHFFALILDPADPAVRRKG-SFLRKIFDRSKHTHVIENSFCYICQTQVSSRSKHCSACNKCVSDFDHHCKWLNNCVGGRNYKLFLGCCISAILTALLMFVIDFYLMIAYYTD--------QENVLKRAVLNTWQLFVPVCK-----EAYIIFVIVNGLLLLVAMLLIGHLLLFHCYLLCKNLSTYDYIMQSRTATSASKASLPSDVETGDEPAPPVLRPLSSQSHTYQEVDDVRKE 305
            Q Q  R NG S P HPLQ++ W     F +  FGILV  LP  WVP G       +  HL  H  A+ +DPAD  VR K  +    IF+RS+H HVIE+  C +C   VS+RSKHCSACNKCV  FDHHCKWLNNCVG RNY+LFL    SA+L  LL+ ++  Y+ + ++ +           VLK    + W +F+P         A +    +  LL L++  L+GHLL FH YL+   L+TY+YI+Q R    A        V    E  PP +RP+       +    +R E
Sbjct:   35 QGQRSRRNGWSWPPHPLQIVAWLLYLFFAVIGFGILVPLLPHHWVPAGYACMGAIFAGHLVVHLTAVSIDPADANVRDKSYAGPLPIFNRSQHAHVIEDLHCNLCNVDVSARSKHCSACNKCVCGFDHHCKWLNNCVGERNYRLFLHSVASALLGVLLLVLVATYVFVEFFVNPMRLRTNRHFEVLKNHT-DVWFVFLPAAPVETQAPAILALAALLILLGLLSTALLGHLLCFHIYLMWHKLTTYEYIVQHRPPQEA------KGVHRELESCPPKMRPIQEMEFYMRTFRHMRPE 324
The following BLAST results are available for this feature:
BLAST of TCONS_00012382-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZDHC16.537e-5440.40Probable palmitoyltransferase ZDHHC1 OS=Homo sapie... [more]
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