TCONS_00011918-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011918-protein
Unique Name	TCONS_00011918-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	728

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011918-protein ID=TCONS_00011918-protein|Name=TCONS_00011918-protein|organism=Clytia hemisphaerica|type=polypeptide|length=728bp
RRLIMMLLAGPLDALLKNCKQNKWRPKFEENKISIMGKGRNAKSLPKSRS
HDKKNDKSSSIDISSLGIDKYKIFVLILAAIIGYLHSQHVYGMFEQQRFF
SHLSTLERELSFRTEMGLYYSYYKTMAEAPSLYDGLHDLVRCNITEYPDK
VNVLRRFNLYPEVFLGMAYRAYNYVSSVMNWETKKCYSINRGQGLSPVES
CVGLGDIAHFYVFPIFGLAGFQMAVIFILGCYVGGNILGGVLSVSSFFFN
HGEATRVMWTPPLRESFSFPFLMVQMLTVVHILKVHKPSVFHSILLAITT
VLFMLPWQFAQFALLTQVCSLFALYILKFIDSKRMLVFLNGLLIGHAVNF
VAQFANTLLLSSFFMAAMIAILIVVKLESTIEKLPNRVLIWLVQGISFIV
LSVAIKIAIAIVFQIKDDAHIFDILKSKFTDYKDFHTQLYVCAPEFDFIG
WEYFEKLSKTFLIPSAGFVTLTVVIRVLINEWKYWIVGENIQEDDDDQTS
PTKPFARALYLVLQAACFLVMAVMLMRLKLFSTPALCILSSLLASREVYS
FIPKRIQQYAAVFIILGVMSVQGYPNLKEQFNMKGEYNNPELEQLIEWLR
EHSNPNDVFAGAMPTMAAIKLSVKRPIVNHPHYEDSGLRARTKRVYQMYS
RKPCEFVHDEIKAMGVTYYVFEDSWCFRSFRDGCALPEVWDIEDPKNKGR
PSCCSLIRQNPGRFKIIFSNKTYVVLKV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006699	XLOC_006699	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011918	TCONS_00011918	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018732	Dpy-19/Dpy-19-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018732	Dpy-19/Dpy-19-like	PFAM	PF10034	Dpy19	coord: 81..728 e-value: 6.7E-216 score: 718.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..59

Blast

[Close]

BLAST of TCONS_00011918-protein vs. Swiss-Prot (Human)
Match: D19L1 (Probable C-mannosyltransferase DPY19L1 OS=Homo sapiens GN=DPY19L1 PE=2 SV=1)

HSP 1 Score: 598.971 bits (1543), Expect = 0.000e+0
Identity = 301/647 (46.52%), Postives = 433/647 (66.92%), Query Frame = 0

Query:   85 LHSQHVYGMFEQQRFFSHLSTLERELSFRTEMGLYYSYYKTMAEAPSLYDGLHDLVRCNITEYPDKVNVLRRFNLYPEVFLGMAYRAYNYVSSVMNWETKKCYSINRGQGLSPVESCVGLGDIAHFYVFPIFGLAGFQMAVIFILGCYVGGNILGGVLSVSSFFFNHGEATRVMWTPPLRESFSFPFLMVQMLTVVHILKVHKPSVFHSILLAITTVLFMLPWQFAQFALLTQVCSLFALYILKFIDSKRMLVFLNGLLIGHAVNFVAQFANTLLLSSFFMAAMIAILIVVKLESTIEKLP-NRVLIWLVQGISFIVLSVAIKIAIAIVFQIKDDAHIFDILKSKFTDYKDFHTQLYVCAPEFDFIGWEYFEKLSKTFLIPSAGFVTLTVVIRVLINEWKYWIVGE-NIQEDDDDQTSPTKPFARALYLVLQAACFLVMAVMLMRLKLFSTPALCILSSLLASREVYSFIPKRIQQYAAVFIILGVMSVQGYPNLKEQFNMKGEYNNPELEQLIEWLREHSNPNDVFAGAMPTMAAIKLSVKRPIVNHPHYEDSGLRARTKRVYQMYSRKPCEFVHDEIKAMGVTYYVFEDSWCFRSFRDGCALPEVWDIEDPKNKGR-PSCCSLIRQNPGRFKIIFSNKTYVVLKV 728
            LH  H+  +FE  R FSHLSTLERE++FRTEMGLYYSY+KT+ EAPS  +G+  ++   +TEYP  +N L+RFNLYPEV L   YR Y  +  ++  +TK C+++ RG+GLSP+ESC GLGD A FYV  IF L G  MA+ FI G Y+ G+ LGG+++V  FFFNHGE TRVMWTPPLRESFS+PFL++QML V HIL+  K      I L I+ V FMLPWQFAQF LLTQ+ SLFA+Y++ +ID  ++   +   +I  A+ FV  F N++LL+S++ ++++ I  ++ ++    K+  + + +W++QG  ++  +V +K   + +F I DDAHI ++L SKF  YKDF T LY CA EFDF+  E   + +KT L+P    V + +V +++ + W      + ++++   D           +Y  LQ   +  + +++MRLKLF TP +C+++SL+ SR+++ ++  ++   A VF IL  MS+QG  NL+ Q+N+ GE++N   E+LIEW++  + P+ VFAGAMPTMA++KLS  RPIVNHPHYED+GLRARTK VY MYSRK  E V  E+  + V YY+ E+SWC R  + GC++PE+WD+EDP N G+ P C  L++ +   F  +F N  Y VL+V
Sbjct:   33 LHWSHITHLFENDRHFSHLSTLEREMAFRTEMGLYYSYFKTIVEAPSFLNGVWMIMNDKLTEYPLVINTLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPACFYVAVIFILNGLMMALFFIYGTYLSGSRLGGLVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQMLLVTHILRATKLYRGSLIALCISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYIDICKLRKIIYIHMISLALCFVLMFGNSMLLTSYYASSLVIIWGILAMKPHFLKINVSELSLWVIQGCFWLFGTVILKYLTSKIFGIADDAHIGNLLTSKFFSYKDFDTLLYTCAAEFDFMEKETPLRYTKTLLLPVVLVVFVAIVRKIISDMWGVLAKQQTHVRKHQFDH-------GELVYHALQLLAYTALGILIMRLKLFLTPHMCVMASLICSRQLFGWLFCKVHPGAIVFAILAAMSIQGSANLQTQWNIVGEFSNLPQEELIEWIKYSTKPDAVFAGAMPTMASVKLSALRPIVNHPHYEDAGLRARTKIVYSMYSRKAAEEVKRELIKLKVNYYILEESWCVRRSKPGCSMPEIWDVEDPANAGKTPLCNLLVKDSKPHFTTVFQNSVYKVLEV 672

The following BLAST results are available for this feature:

BLAST of TCONS_00011918-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011918-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
D19L1	0.000e+0	46.52	Probable C-mannosyltransferase DPY19L1 OS=Homo sap...	[more]

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TCONS_00011918-protein (polypeptide) - C. hemisphaerica