TCONS_00011507-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011507-protein
Unique Name	TCONS_00011507-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	580

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011507-protein ID=TCONS_00011507-protein|Name=TCONS_00011507-protein|organism=Clytia hemisphaerica|type=polypeptide|length=580bp
MEVPSLLFLLKQEKNSFTFDGGGKPKDPRLHRSKLPDDKIIEKEPNSTHF
LFSKNGHSVGKRKDENLDKYYCSSHSEQHHCRQIGYAGQKCMRRESDFDV
GFSRSNKVFDANENLSHPKQSLSLALLLNQRTPERTKNHDRNGESSDFGS
IHNRNESPLSLSQLLESEDKNVRNINNYRTENVEADRTKNNVYPTPTDGV
EATRTKDENLSSLLQDVVLSQEEENNETEKDSEIEDDDDDDLEAYNYDED
ITPEKFVVDEHFAASQQSQHVAGMSSLKPCQRRMRSKSVSPNFVQRQQAD
CSKNGTATKPIAARRLAMVAGTVPIFNAKTGLPLSSSPAPIKKPRKISES
SCGSNLSKSSSLDDLQPCALGLSKSAPAPSSLLGNFEESVLNGRMPINGF
LEGFWAKLGASGTFCPKHINIPMEIQYFSLSDDNAPSPYLGRITLRDKKK
RKRYRVPRKGTVQLTIFNPNKTVVKVFVVVYNFEDMPDYTRTFLRQKIVA
ADSTNSKNDVPTLHYLIHLSFVSSKSSHIYLHSDIRVLFRQRAPDEPLKT
ITNGPTNPKYTSITKRSHPFKGGSENDDSS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006442	XLOC_006442	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011507	TCONS_00011507	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025261	DUF4210
IPR033473	FAM214/SPAC3H8.04_C

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025261	Domain of unknown function DUF4210	SMART	SM01177	DUF4210_2	coord: 382..440 e-value: 4.2E-25 score: 99.4
IPR025261	Domain of unknown function DUF4210	PFAM	PF13915	DUF4210	coord: 382..440 e-value: 1.1E-12 score: 48.3
IPR033473	Protein FAM214/SPAC3H8.04, C-terminal	PFAM	PF13889	Chromosome_seg	coord: 512..562 e-value: 2.7E-16 score: 59.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 547..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..240

Blast

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BLAST of TCONS_00011507-protein vs. Swiss-Prot (Human)
Match: F214A (Protein FAM214A OS=Homo sapiens GN=FAM214A PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 7.200e-58
Identity = 127/271 (46.86%), Postives = 167/271 (61.62%), Query Frame = 0

Query:  326 FNAKTGLPLSSSPAPIKKPRKISESSC---GSNLS--KSSSLDDLQPC-----------ALGLSKSAPAPSSL--LGNFEESVLNGRMPINGFLEGFWAKLGASGTFCPKHINIPMEIQYFSLSDDNAPSPYLGRITLRDKKKRKRYRVPRKGTVQLTIFNPNKTVVKVFVVVYNFEDMPDYTRTFLRQKIVAA-------DSTNSKNDVPT----LHYLIHLSFVSSKSSHIYLHSDIRVLFRQRAPD------EPLKTITNGPTNPKYT 561
            F+ +TGLPL SSP P +K    ++S C    S+L   KS S    +PC              LS SAP  +SL  LGNFEESVLN R    G ++GF A++GASG FCP H+ +P+E+ ++S+SDDNAPSPY+G ITL    KR  YRVP  GT+Q+T+FNPNKTVVK+FVV+Y+  DMP   +TFLRQ+  +         S N +N   T    L YLIHL F SSKS  IYLH D+R+LF +++ +        LK+ T  PTNP+++
Sbjct:  808 FHPQTGLPLLSSPVPQRK----TQSGCFDLDSSLLHLKSFSSRSPRPCLNIEDDPDIHEKPFLSSSAPPITSLSLLGNFEESVLNYRFDPLGIVDGFTAEVGASGAFCPTHLTLPVEVSFYSVSDDNAPSPYMGVITLESLGKRG-YRVPPSGTIQVTLFNPNKTVVKMFVVIYDLRDMPANHQTFLRQRTFSVPVKQEVKRSVNKENIRHTEERLLRYLIHLRFQSSKSGKIYLHRDVRLLFSRKSMEVDSGAAYELKSYTESPTNPQFS 1073

The following BLAST results are available for this feature:

BLAST of TCONS_00011507-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011507-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
F214A	7.200e-58	46.86	Protein FAM214A OS=Homo sapiens GN=FAM214A PE=1 SV...	[more]

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TCONS_00011507-protein (polypeptide) - C. hemisphaerica