TCONS_00011393-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011393-protein
Unique NameTCONS_00011393-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length458

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011393-protein ID=TCONS_00011393-protein|Name=TCONS_00011393-protein|organism=Clytia hemisphaerica|type=polypeptide|length=458bp
VQEKHLLKALESKDEKISEDANKRLKVVYAEMEAIGADKAESKARRILSG
LGFTTEMQSRPTKNFSGGWRMRVSLARALFVEPTLLLLDEPTNHLDLNAV
IWLDNYLQQWKKTLLVVSHDQQFLDNVCTDIIHLDMQKLYYYKGNYSSFK
KMYKQKVREHEKAYEKQEKQIKALKASGKSGKQAEAQAKTTTTQKQKKNQ
SKKEQEESSNQQAELLQRLKEYKVKFTLKNPPPLNPPILGLKDAAFGYPG
QPKLFNSVDFGIDMNSRIAIVGPNGVGKSTFIKMLLKKCDLVDGEVIKNP
RLRIGFYNQHSADQLTLDESPVEYLQREFNMQYQDCRKLLGRFGLAGHAH
TIKIKDLSGGQKSRVALADMASREPDIIILDEPTNNLDIESIDALAEAIN
QYTGGVIIVSHDARLILETNCQLWVIEDKSIEEIDGDFDDYRKEILDQLG
EEAVSKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006389XLOC_006389Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011393TCONS_00011393Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 150..177
NoneNo IPR availableGENE3D3.40.50.300coord: 234..458
e-value: 4.4E-42
score: 143.9
NoneNo IPR availableGENE3D3.40.50.300coord: 5..224
e-value: 2.1E-40
score: 137.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..212
NoneNo IPR availableCDDcd03221ABCF_EF-3coord: 65..138
e-value: 5.94823E-36
score: 129.106
NoneNo IPR availableCDDcd03221ABCF_EF-3coord: 241..429
e-value: 2.20643E-44
score: 152.603
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 264..430
e-value: 5.7E-11
score: 52.5
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 256..385
e-value: 4.6E-22
score: 78.9
coord: 20..93
e-value: 1.7E-10
score: 41.4
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 239..453
score: 15.546
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 357..371
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 37..163
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 220..439

Blast
[Close]
BLAST of TCONS_00011393-protein vs. Swiss-Prot (Human)
Match: ABCF1 (ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2)

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 297/457 (64.99%), Postives = 365/457 (79.87%), Query Frame = 0 
Query:    2 QEKHLLKALESKDEKISEDANKRLKVVYAEMEAIGADKAESKARRILSGLGFTTEMQSRPTKNFSGGWRMRVSLARALFVEPTLLLLDEPTNHLDLNAVIWLDNYLQQWKKTLLVVSHDQQFLDNVCTDIIHLDMQKLYYYKGNYSSFKKMYKQKVREHEKAYEKQEKQIKALKASGKSGKQAEAQAKTTTTQKQKKNQSKKEQEESSNQQAELLQRLKEYKVKFTLKNPPPLNPPILGLKDAAFGYPGQPKLFNSVDFGIDMNSRIAIVGPNGVGKSTFIKMLLKKCDLVDGEVIKNPRLRIGFYNQHSADQLTLDESPVEYLQREFNMQYQDCRKLLGRFGLAGHAHTIKIKDLSGGQKSRVALADMASREPDIIILDEPTNNLDIESIDALAEAINQYTGGVIIVSHDARLILETNCQLWVIEDKSIEEIDGDFDDYRKEILDQLGEEAVSKKK 458
            +E+ L   LE  D+  +E    RL+ VY E+ A GA  AE+KARRIL+GLGF  EMQ+RPT+ FSGGWRMRVSLARALF+EPTLL+LDEPTNHLDLNAVIWL+NYLQ W+KTLL+VSHDQ FLD+VCTDIIHLD Q+L+YY+GNY +FKKMY+QK +E  K YEKQEK++K LKA GKS KQAE Q K   T+KQ+K + +K Q+E S +  ELL+R KEY V+FT  +PPPL+PP+LGL    FGY GQ  LF ++DFGIDM+SRI IVGPNGVGKST + +L  K     GE+ KN RL+IGF+NQ  A+QL ++E+P EYLQR FN+ YQD RK LGRFGL  HAHTI+I  LSGGQK+RV  A++A REPD++ILDEPTNNLDIESIDAL EAIN+Y G VI+VSHDARLI ETNCQLWV+E++S+ +IDGDF+DY++E+L+ LGE  VS+ +
Sbjct:  393 EERRLQGQLEQGDDTAAE----RLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEALTRKQQKCR-RKNQDEESQEAPELLKRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGYQGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEVMVSRPR 844
The following BLAST results are available for this feature:
BLAST of TCONS_00011393-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCF10.000e+064.99ATP-binding cassette sub-family F member 1 OS=Homo... [more]
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