TCONS_00011390-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011390-protein
Unique NameTCONS_00011390-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length725

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011390-protein ID=TCONS_00011390-protein|Name=TCONS_00011390-protein|organism=Clytia hemisphaerica|type=polypeptide|length=725bp
MVKQNMNRSFCWPRNREKNTSTSSAEQSEDLLDMKTRIEVFSPEDEQDGK
DGGRTFLCGFHHWTPQFLQWFANIHWFLPFISIFCLLQGMTVNGFIGASI
PHIEREFGLTSTQSGILLASNDLTAILFVLFVSYYGERGHKPTWLGIGSI
VTGLGAFIFALPKFMKGAYNPTMSPHGVNYMKHDTCAGNATSAFMELGNM
ADCDSAPSSNGYLAIFCVANMLMGIGATPLNTLGAAYLDENVSPKNSPIY
IGIWYGMLILGPSIGLGSAGAFLKQYTNADGAPPPGITFMHPLWVGRWWY
PFATLSWILVFNGFILMLFPKKMPGAPRIRQKAIQNGDIPQESSELEEIR
KNGFLGFLKSTLILMKNKYLMVVLVATSAELFIVTGLTPFFPKFLNSRFG
ADPVKAVVMLGTILITGSVVGLVVGSMIMRSFNIKSSVKKATIISIVLAI
INIGVSFSHDIPGCDNINLERGALTLNNAVCNNNCGCLKEHYNPVCANGI
TYLSPCVAGCTNKMNMTGFSGCSCIEAKGGPQAINNQTLGSVRPGKCDQD
CKNLIVFVIFIGVLVMSSLIGVTPKNMITLRSVPANQRSFAMGLHFLIVR
LLGMLPGPIVVGKIYDRSCMVWKHDMCGHRAFCAEYELISLSSQIRNVAL
IGFVINLVLFVVAYWLYKDPSNDENYAPALICNDGAKHNGDLVEDGNHNN
GNIIVKNHQQPNSSVQMSDIKGADM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006387XLOC_006387Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011390TCONS_00011390Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004156OA_transporter
IPR020846MFS_dom
IPR002350Kazal_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 64..335
e-value: 6.0E-22
score: 77.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 362..677
e-value: 1.4E-20
score: 73.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 705..725
NoneNo IPR availableCDDcd01330KAZAL_SLC21coord: 481..526
e-value: 4.55966E-17
score: 75.4185
IPR004156Organic anion transporter polypeptide OATPPFAMPF03137OATPcoord: 76..637
e-value: 2.7E-131
score: 438.5
IPR004156Organic anion transporter polypeptide OATPTIGRFAMTIGR00805TIGR00805coord: 58..668
e-value: 1.8E-125
score: 417.4
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 77..671
score: 9.251
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 78..430
e-value: 9.44337E-9
score: 55.3977
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 552..671
coord: 216..463
coord: 67..162
IPR002350Kazal domainPROSITEPS51465KAZAL_2coord: 475..526
score: 9.013

Blast
[Close]
BLAST of TCONS_00011390-protein vs. Swiss-Prot (Human)
Match: SO4C1 (Solute carrier organic anion transporter family member 4C1 OS=Homo sapiens GN=SLCO4C1 PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 5.442e-97
Identity = 206/670 (30.75%), Postives = 328/670 (48.96%), Query Frame = 0 
Query:   13 PRNREKNTSTSSAEQSEDLLDMKTRIEVFSPEDEQDGKDGGRTFLCGFHHWTPQFLQWFANIHWFLPFISIFCLLQGMTVNGFIGASIPHIEREFGLTSTQSGILLASNDLTAILFVLFVSYYGERGHKPTWLGIGSIVTGLGAFIFALPKFMKGAYNPTMSPHGVNYMKHDTCAGNATSAFMELGNMADCDSAPSSNGYLAIFCVANMLMGIGATPLNTLGAAYLDENVSPKNSPIYIGIWYGMLILGPSIGLGSAGAFLKQYTNADGAPPPGITFMHPLWVGRWWYPFATLSWILVFNGFI-LMLFPKKMPGAPRIRQKAIQNGDIPQESSELEEIRKNGFLGFLKSTLILMKNKYLMVVLVATSAELFIVTGLTPFFPKFLNSRFGADPVKAVVMLGTILITGSVVGLVVGSMIMRSFNIKSSVKKATIISIVLAIINIGVSFSHDIPGCDNINLERGALTLNN--------AVCNNNCGCLKEHYNPVCANGITYLSPCVAGCTNKMNMTG---FSGCSCIEAKGGPQAINNQTLGSVRPGKCDQDCKNLIVFVIFIGVLVMSSLIGVTPKNMITLRSVPANQRSFAMGLHFLIVRLLGMLPGPIVVGKIYDRSCMVWKHDMCGHRAFCAEYELISLSSQIRNVALIGFVINLVLFVVAYWLYKDP 670
            P+  +K+   S      ++ + K R    S  + ++G  G R F        PQ LQ       FL    +  + QG+ VNG +  SI  +E+ + + S+ +G++ +S D++  L  LFVS++GERGHKP WL   + + GLGA +F+LP+F  G Y        +  +  DTC     S        +  +       YL +F +  +L+G G TPL TLG A+LD++V    S +YIG  Y M ILGP+IG    G  L  Y +        +T   P W+G WW  F  LSWI  ++  I    FPK +PG   I  +A +     Q +S  +         F  +   LMKN   M ++++TS+E  I TG   F PKF+ ++FG     A  + G +LI G+ +G ++G  ++  F +  + K     ++  + + + +SF      C+N      + + N         A CN NC C + +Y PVC +G+ Y SPC AGC+N +       +  CSCIE K    +         + GKC+  C  L +F+    ++++ + +  TP  +  LR V   QRS A+G+ F+++RLLG +PGPI+ G   D +C++W  + CG +  C  Y+ I ++  +  +++   VI +     A +LYK P
Sbjct:   52 PQEPQKSPEPSLPSAPPNVSEEKLR--SLSLSEFEEGSYGWRNF-------HPQCLQRCNTPGGFLLHYCLLAVTQGIVVNGLVNISISTVEKRYEMKSSLTGLISSSYDISFCLLSLFVSFFGERGHKPRWLAFAAFMIGLGALVFSLPQFFSGEYK-------LGSLFEDTCVTTRNSTSCTSSTSSLSN-------YLYVFILGQLLLGAGGTPLYTLGTAFLDDSVPTHKSSLYIGTGYAMSILGPAIGYVLGGQLLTIYIDVAMGESTDVTEDDPRWLGAWWIGF-LLSWIFAWSLIIPFSCFPKHLPGTAEI--QAGKTSQAHQSNSNADVKFGKSIKDFPAALKNLMKNAVFMCLVLSTSSEALITTGFATFLPKFIENQFGLTSSFAATLGGAVLIPGAALGQILGGFLVSKFRM--TCKNTMKFALFTSGVALTLSFVFMYAKCENEPFAGVSESYNGTGELGNLIAPCNANCNCSRSYYYPVCGDGVQYFSPCFAGCSNPVAHRKPKVYYNCSCIERKTEITSTAETFGFEAKAGKCETHCAKLPIFLCIFFIVIIFTFMAGTPITVSILRCVNHRQRSLALGIQFMVLRLLGTIPGPIIFGFTIDSTCILWDINDCGIKGACWIYDNIKMAHMLVAISVTCKVITMFFNGFAIFLYKPP 693
The following BLAST results are available for this feature:
BLAST of TCONS_00011390-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SO4C15.442e-9730.75Solute carrier organic anion transporter family me... [more]
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