Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00011362-protein ID=TCONS_00011362-protein|Name=TCONS_00011362-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1838bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00011362-protein vs. Swiss-Prot (Human)
Match: LAMB1 (Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2) HSP 1 Score: 430.639 bits (1106), Expect = 9.276e-124 Identity = 299/982 (30.45%), Postives = 459/982 (46.74%), Query Frame = 0 Query: 38 CLPGPIDIAENHEINVDDKYTCGTPTTK-YCRSA---EPSGCFICNASSTMNS--HPVRHMTDKDFPLNFWDFGYKPTWWQSITWWDAKQMNILTDGTLKINLTLSMNKSYDLTGSIQLTFYSSKPHAFVIERSSDFGNSWKPYRYYADQCALRFPRIKLESQRNDEREVYCIEHQSLDAVQGSQVKF---EPSYTKDNFWSKDIQDYITATDFRISLQYPWTDNNEKINQE-SFLNKYYYDITDVQIHGRCHCNGHAPYCDS------------NKQCFCQHNTAGTDCEKCIPLFNNKPWKPAEASNKPNPCEACNCNNHAGSCHYNETL-------EHGVCDECRNGTTGYHCERCDDFHYRNISLPINDERVCIACDCFLPGTTNNGKC--LQNSTINQAAGQCPCKPNVFGMRCDECKDGYFGLRLSPDGNCEACNCSINGTIQGETNCDQQTGKCRCKPTIGGRTCSQCQPGYFNFPETLTDECEECDCKIGGSYNETCDQETGSCYCRFGISGRHCDQITSGTYVPSFNHYILEAEQ-----GGGLLERISDIDGYGQRFSGYGYALVNASGSVELTFTPDM--TRLFHIQIRY---------KELVHPQNITMELHFSNTGSTI-----QLISTANILQRGSDKMILAK-VILVSGGNYTFKI-------TNIDTNDQSMMLDSLVLLPDYEGVDLHRNSGPSVEELIAN----------CWNESLSSMTFEVTEGCKDVVFSTNIEIYDGSQECKCDTIGSWNTTCETYGGQCYCKEGVMGRKCDQCMAGYFNFTTNGCQKCECDSTGSTDFACNVESGQCSCKKNIITRTCSQCQTNYFGFGTLEGCRDCGCNMNGSS----SLQCLDNGICVCKESTQGQKCDRCQINYYG----FSGTGCNRCGCNEDGSVSLQ----CDQDTG----KCSCKSNVIIEKCSSCKTGYFNLMKENHQGCQECFCFNKTDT 933 C P D+ + TCG + YC + E CFICN+ + +P H+ + + F K WWQS +G + + L + + T I +TF + +P A +IERSSDFG +W YRY+A C FP I + + + + ++ +V F +P++ ++ +S IQ+ + T+ RI T + ++ KYYY + D+ + G C C GHA C + C C+HNT G +CE C+ +++ PW+PAE N N C+ CNCN H+ SCH++ + GVCD+C++ T G +CE+C F+Y++ I D C C C G+ N G C + + AGQC CK NV G CD CK+G++ L C++C C+ GTI G CD +TG C CK + G+ C QC P ++ L D C CDC +GG+ N +C E+G C CR + GR C+++ G Y + +HY+ EAE+ G ++ER I ++G G+ V +E F ++ + + I IRY K ++ Q S G+TI Q++S L GS ++L + V G NYT ++ ++ D ++DSLVL+P + +D+ G S + ++ N C S S + +T+ C++++FS + ++ C+CD GS ++ C+ GGQC C+ V+GR C++C G F F +GC+ CEC GS + CN +GQC C + + R C +C ++GF + C+ C CN + + +CL+ C++ T G C+RC YYG SG C C C + Q C QD C C I +C C +GYF E CQ C C N DT Sbjct: 35 CYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIE-NVVTTFAPNRLK-IWWQS------------ENGVENVTIQLDLEAEFHFTHLI-MTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCEASFPGISTGPMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNS-NACKKCNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNFCERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDL-DGCRPCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYYFATLDHYLYEAEEANLGPGVSIVER-QYIQDRIPSWTGAGFVRVPEGAYLEF-FIDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGRIPTSSRCGNTIPDDDNQVVS----LSPGSRYVVLPRPVCFEKGTNYTVRLELPQYTSSDSDVESPYTLIDSLVLMPYCKSLDIFTVGG-SGDGVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPS---CQPCQCNGHADDCDPVTGECLN-----CQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDT 984 HSP 2 Score: 115.161 bits (287), Expect = 2.321e-25 Identity = 97/314 (30.89%), Postives = 129/314 (41.08%), Query Frame = 0 Query: 279 CHCNGHAPYCDS-NKQCF-CQHNTAGTDCEKCIPLFNNKPWKPAEASNKPNPCE----------------------ACNCN-NHAGS------------------------CHYNETL--------EHGVCDECRNGTTGYHCERCDDFHYRNISLPINDERVCIACDCFLPGTTNNGKCLQNSTINQAAGQCPCKPNVFGMRCDECKDGYFGLRLSPDGNCEACNCSINGTIQGETNCDQQTGKCRCKPTIGGRTCSQCQPGYFNFPETLTDECEECDCKIGGSYNETCDQETGSCYCRFGISGRHCDQITSG 535 C CNGHA CD +C CQ T G +CE+C+ + P + +P PC AC C+ + GS CH N E G C +C T G HC+ C F Y +L ++ C C C GT + ++A GQC C PNV G CD C + +L+ C+ CNC N +C++ TG+C+C P GGRTCS+CQ ++ P+ EC CDC G CDQ TG C C G+ G CD+ T G Sbjct: 867 CQCNGHADDCDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCR-FGYYGDAL----QQDCRKCVCNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTW--QLASGTGCDPCNC--NAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDV---ECRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRG 1168 HSP 3 Score: 107.457 bits (267), Expect = 5.669e-23 Identity = 82/274 (29.93%), Postives = 118/274 (43.07%), Query Frame = 0 Query: 279 CHCNGHA-PYCDS-NKQCFCQHNTAGTDCEKCIPLFNNKPWKPAEASNKPNPCEACNCNNHAGSCHYNETLEHGVCDECRNGTTGYHCERCDDFHYRNISLPINDERVCIACDCFLPGTTNNGK-----CLQNSTINQAAGQCPCKPNVFGMRCDECKDGYFGLRLSPDGNCEACNCSINGTIQGETNCDQQTGKC-RCKPTIGGRTCSQCQPGYFNFPETLTDECEECDCKIGGSYNE-------TCDQETGSCYCRFGISGRHCDQITSGTY 537 CH G +C+ QC C C++C+P P C+ C CN HA C G C C++ T G++CERC +Y + + D C C C P ++G+ C Q+ Q A C C P G RCD+C GYFG G+C+ C C N CD++TG+C +C G C C+ GY+ + L +C +C C G+ E CD+ TG C C + G++CD+ T+ Sbjct: 823 CHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFP-----------SCQPCQCNGHADDCDPVT----GECLNCQDYTMGHNCERCLAGYYGDPIIGSGDH--CRPCPC--PDGPDSGRQFARSCYQDPVTLQLA--CVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYG--DALQQDCRKCVCNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTW 1073 HSP 4 Score: 94.3597 bits (233), Expect = 5.272e-19 Identity = 67/227 (29.52%), Postives = 98/227 (43.17%), Query Frame = 0 Query: 712 CKDVVFSTNIEIYDGSQECKC-DTIGSWNT-TCETYGGQCY-CKEGVMGRKCDQCMAGYF-NFTTNGCQKCECDSTGS-------TDFACNVESGQCSCKKNIITRTCSQCQTNYFGFGTLEGCRDCGCNMNGSSSLQCLD-NGICVCKESTQGQKCDRCQINYYGFSGTGCNRCGCNEDGSVSLQCDQDTGKCSCKSNVIIEKCSSCKTGYFNLMKENHQGCQECF 926 C F E+ Q C+C + I + + C+ G+C C G C C GY+ + C+KC C+ G+ +D C+ +GQC C N+I + C +C N + + GC C CN S C + G C C G+ C CQ ++G C C C+ G + QCDQ TG+C C V +C C GY + + C +CF Sbjct: 958 CASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALQQDCRKCVCNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFP-DCTPCHQCF 1183 The following BLAST results are available for this feature:
BLAST of TCONS_00011362-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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