TCONS_00011109-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011109-protein
Unique NameTCONS_00011109-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length334

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011109-protein ID=TCONS_00011109-protein|Name=TCONS_00011109-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MTSINGEIDQYGFERAEDFDYESYEKFMAEYLSVLARRLAKWEKMLNGTN
DVSRSTKVKRYIRKGIPSEHRCEIWMATSKAQEMKDQSPNKYNQLVSEPT
AEQKVKDSIKIDIRRTYPENVFFKEIQDGLLDPLANVLTAFASYNTKVGY
CQGLNYIAGMLLLITKNEENAFWLLVELVENIVPDFYSTHMLGLRIECKV
LQKMINLLAPDLSQHFAQNKIDMELLASKWFVCLFTDVLPVETQLRVWDC
LFYEGSKVILRAALTIILMNKEKFLAQTDFALLCNIFKEIIHDENALNCH
NFMQQCFILPKSLSRAKIQKLREEARLEIEAEKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006220XLOC_006220Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011109TCONS_00011109Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 315..334
NoneNo IPR availableGENE3D1.10.10.750coord: 36..79
e-value: 2.3E-12
score: 46.2
NoneNo IPR availableGENE3D1.10.8.270coord: 82..180
e-value: 1.8E-23
score: 82.1
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 62..278
e-value: 1.4E-57
score: 207.3
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 69..275
e-value: 1.7E-54
score: 184.7
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 65..255
score: 36.514
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 41..215
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 191..311

Blast
[Close]
BLAST of TCONS_00011109-protein vs. Swiss-Prot (Human)
Match: GRTP1 (Growth hormone-regulated TBC protein 1 OS=Homo sapiens GN=GRTP1 PE=1 SV=4)

HSP 1 Score: 320.472 bits (820), Expect = 9.041e-109
Identity = 156/326 (47.85%), Postives = 210/326 (64.42%), Query Frame = 0 
Query:    8 IDQYGFERAEDFDYESYEKFMAEYLSVLARRLAKWEKMLNGTNDVSRSTKVKRYIRKGIPSEHRCEIWMATSKAQEMKDQSPNKYNQLVSEPTAEQKVKDSIKIDIRRTYPENVFFKEIQDGLLD-PLANVLTAFASYNTKVGYCQGLNYIAGMLLLITKNEENAFWLLVELVENIVPDFYSTHMLGLRIECKVLQKMINLLAPDLSQHFAQNKIDMELLASKWFVCLFTDVLPVETQLRVWDCLFYEGSKVILRAALTIILMNKEKFLAQTDFALLCNIFKEIIHDENALNCHNFMQQCFILPKSLSRAKIQKLREEARLEIEAE 332
            ID YGFER EDFD  +YEKF + YL  L RR  KW ++L G   V RS  VKRY+RKG+P EHR  +WM  S AQ   DQ+P  Y+QL+ +     +++D+I+ D+ RT+P+NV F++  D  L   L NVL A+  +N  VGYCQG+N+IAG L+LIT NEE +FWLL  LV  I+PD+YS  MLGL+ + +VL +++    P +     +  +   LL S+WF+CLF D+LPVET LR+WDCLF EGSK+I R ALT+I  ++E  L  T    +C+ FK+I      + CH FMQ+ F  P SLS A + KLRE  R  + A+
Sbjct:   12 IDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQG-GGVPRSRTVKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLL-QGERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQKIFSEPGSLSMATVAKLRESCRARLLAQ 335
The following BLAST results are available for this feature:
BLAST of TCONS_00011109-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRTP19.041e-10947.85Growth hormone-regulated TBC protein 1 OS=Homo sap... [more]
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