TCONS_00011026-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011026-protein
Unique NameTCONS_00011026-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011026-protein ID=TCONS_00011026-protein|Name=TCONS_00011026-protein|organism=Clytia hemisphaerica|type=polypeptide|length=185bp
MPEKKDPKKKEAKPKAVEAPKEEAPKEAAPPPPAETQQISLTDEQLEELR
DAFTLFDKVGDDKVCHSQIIDILRSLKLNPLTCDVEKVIKDSGLEGVRVD
FPTFASIYEQFKKRKTLANYDDMIEMFKCFDREGTKMVFGGEFRMVLVNM
GDTMNDEQLEKMIAPSENADGYIPYESLLEFVLSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006180XLOC_006180Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011026TCONS_00011026Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 107..137
e-value: 0.0023
score: 17.2
NoneNo IPR availableGENE3D1.10.238.10coord: 34..106
e-value: 4.4E-9
score: 35.6
NoneNo IPR availableGENE3D1.10.238.10coord: 138..182
e-value: 6.3E-6
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 44..79
score: 9.046
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 118..153
score: 8.655
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 168..185
score: 5.252
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 41..183

Blast
[Close]
BLAST of TCONS_00011026-protein vs. Swiss-Prot (Human)
Match: MYL6B (Myosin light chain 6B OS=Homo sapiens GN=MYL6B PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.421e-36
Identity = 67/176 (38.07%), Postives = 102/176 (57.95%), Query Frame = 0 
Query:   12 AKPKAVEAPKEEAPKEAAPPPPAETQQISLTDEQLEELRDAFTLFDKVGDDKVCHSQIIDILRSLKLNPLTCDVEKVI---KDSGLEGVRVDFPTFASIYEQFKKRKTLANYDDMIEMFKCFDREGTKMVFGGEFRMVLVNMGDTMNDEQLEKMIAPSENADGYIPYESLLEFVLS 184
            A+P   +AP+    K   PP       I    +QLEE ++AF LFD+VGD K+ +SQ  D++R+L  NP   +V KV+   K   L+  RVDF TF  + +   K +    Y+D +E F+ FD+EG   V G E R VL  +G+ M +E++E ++A  E+++G I YE+ L+ +LS
Sbjct:   36 AEPAVPQAPQ----KTQEPPVDLSKVVIEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHEDSNGCINYEAFLKHILS 207
The following BLAST results are available for this feature:
BLAST of TCONS_00011026-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYL6B3.421e-3638.07Myosin light chain 6B OS=Homo sapiens GN=MYL6B PE=... [more]
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