TCONS_00010954-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010954-protein
Unique NameTCONS_00010954-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length456

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010954-protein ID=TCONS_00010954-protein|Name=TCONS_00010954-protein|organism=Clytia hemisphaerica|type=polypeptide|length=456bp
NCIFNFDETNFANNINTGKVIVKRGMRRVEKVVDTSKQNISVMFCGDADG
NFLPPMVVYKSKWVWDKWTEGGPRGTVYSHSAKGWFETRTFGQWFKLVLL
PHLQKLPPGKKVIIGDNLGCHFSAEVISLCKENAISFLPLVPNSTHLCQP
LDVAVFKPLKQVWSGVLSKWRSETGMKKEIPKTSFPLLLRRTCMNLTPKN
LKSGFRTCGIAPVNKDEILKKIPPEERNVTDVLNQGTVELLKEMYPKNTT
QTQKRGRKVEPGRNVADMSTDEEDSESDTVLEEEEEEEEEEVTDWSDEES
EDEELDNEEDNEDLGDRHDYFITTEHQEELDEDIDYAVDYEFDENVSPYE
EDDEDDELSEGVCTVEINRPKRQEPSACQVHNEQNDDEEEAEGQWNCFKC
KKDYDDANEEIWVECEFHKCRKRFHVECSGIRGGPYTCEEQLKDVNFRCR
HCRRMK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006157XLOC_006157Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010954TCONS_00010954Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR004875DDE_SF_endonuclease_dom
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 396..453
e-value: 7.4E-6
score: 35.5
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 37..177
e-value: 1.7E-18
score: 66.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 385..456
e-value: 6.0E-5
score: 22.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..316
NoneNo IPR availableCDDcd15489PHD_SFcoord: 397..452
e-value: 0.00254398
score: 34.9854
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 397..452
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 382..454

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010954-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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