TCONS_00010914-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010914-protein
Unique NameTCONS_00010914-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length147

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010914-protein ID=TCONS_00010914-protein|Name=TCONS_00010914-protein|organism=Clytia hemisphaerica|type=polypeptide|length=147bp
MINIDYFASGITRKTRVLDVVYNASNNELVRTKTLVKNAIILIDATPFKQ
WFEAHYGVAVGRKKGHKIPEGEEDPLNKTRSKHAKAKIAARKPDSKIDHH
LEEQFTSGRVMACISSRPGQSGRCDGYILEGKELDFYLKKLKTKKGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006128XLOC_006128Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010914TCONS_00010914Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022309Ribosomal_S8e/biogenesis_NSA2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 8..129
e-value: 8.0E-28
score: 97.2
NoneNo IPR availableCDDcd11380Ribosomal_S8e_likecoord: 10..129
e-value: 1.52721E-26
score: 97.205

Blast
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BLAST of TCONS_00010914-protein vs. Swiss-Prot (Human)
Match: RS8 (40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 9.861e-60
Identity = 89/145 (61.38%), Postives = 115/145 (79.31%), Query Frame = 0 
Query:    3 NIDYFASGITRKTRVLDVVYNASNNELVRTKTLVKNAIILIDATPFKQWFEAHYGVAVGRKKGHKIPEGEEDPLNKTRSKHAKAKIAARKPDSKIDHHLEEQFTSGRVMACISSRPGQSGRCDGYILEGKELDFYLKKLKTKKGK 147
            N  + +   TRKTR++DVVYNASNNELVRTKTLVKN I+LID+TP++QW+E+HY + +GRKKG K+   EE+ LNK RSK  + K   RK ++KI   LEEQF  G+++ACI+SRPGQ GR DGY+LEGKEL+FYL+K+K +KGK
Sbjct:   64 NFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
The following BLAST results are available for this feature:
BLAST of TCONS_00010914-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RS89.861e-6061.3840S ribosomal protein S8 OS=Homo sapiens GN=RPS8 P... [more]
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