TCONS_00010896-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010896-protein
Unique NameTCONS_00010896-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1149

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010896-protein ID=TCONS_00010896-protein|Name=TCONS_00010896-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1149bp
MAGVTPDVEKLRKSTVSLLSSILTAQAKVGIPLHSLAYEYEETVFEKLKI
KEMGYGTIQQFITDYSNVFTMSPGMGGHLYVKAIPTDETAHIHRLVAGQK
KKTKKKKRKAVVFPVRRFSGPRVARPSTRGGRGGFTFNRNFQQSAVGSSK
PFFSKSPAIANRPPTKTFNTFMNKEKTNNLPPRLQRVIDNQMKIKPPPIN
TFMQPSHHKQNTSFSSSFTQPAASSPIVSSAPLKVTSIASLEQNLKKLLQ
GKPNGLFATRLRPEYKQKFNEDLPADIKQTIQQSLSHFIQIDSPMPNQEI
LYYKQDKPLPSPSLTPIQDDNQKNITQLSLSSTNGERNSFASSTLTHPIP
TSQVEEKNISAQNISSPAVVLQMSSLILPEAEDQLKVYVCHIEDMNRFFV
QLENSTIHILVQEMQDFYNKIAADQYCIAKPKVGEYCVSRFTQDKSWFRA
KILSVKEQFNTINKSYRCHVFYPDYGNDEYVLSTELKSLTKDFCDLPCQA
IQCCLNNIIPIEGTDWNENAINYFKELVDDIELNLKVIENLGTVLSVDLS
DGDGKSVCQHLCTQEYAKEIQPTAPNSPSETRTLPTRLSRSLSLEPTDVL
IKASWVKPPSEEFVDLCVTHIVSSCTVYAKLVGTEYHEKLDLLETAINNS
FENASVKPAAILETGQYYVALHDDEWFRAQLLSIDEENDDYTMFLVDSGK
ETIVSKEEIKNIQPKFLRLPFQAIKCNLKDVPERSDIEILSYMTAVLLGK
ANLGCIYEKNVDTSSETVSKVVLCIYDDFSQDGLEINTVLIEKIEEENKL
VPRLPEIEEEACAGFLTHINEDNDFFIQIMGHGLERLDTITKDISSHFSQ
HSRAAEIIATPDIGQLCCAKWPKASNWYRARVTQIFYPQRKVEVEFIDYG
NTEVIHMVLIRKPLAVSQSVVTLPFQAIKVKLDGVQQLQLEDENMRAKLR
EFIYSLDEVPLQIKNIGTENGTPVVRISIPVLEQGRSIDLLEGFQEFITV
DDFADNGDGLNETSENLNTNDTVNSTFVNISSLNNTLTEHASNNTLSEWD
VISPGNSPVKPSLSHINEEKSSSGVSSSDSITFTSPRHATPAITFSQRWG
IPDLKISDRTIPGLVQDVHDPSKFSIIPYDCWEELMNMFSSMQLFYNVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006121XLOC_006121Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010896TCONS_00010896Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor
IPR025605OST-HTH/LOTUS_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 859..918
e-value: 3.4E-11
score: 53.2
coord: 429..494
e-value: 1.4E-9
score: 47.8
coord: 660..717
e-value: 0.0039
score: 26.4
IPR002999Tudor domainPFAMPF00567TUDORcoord: 808..934
e-value: 1.2E-21
score: 76.9
coord: 383..507
e-value: 4.2E-23
score: 81.6
coord: 610..729
e-value: 2.0E-17
score: 63.3
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 430..496
score: 16.628
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 860..920
score: 15.741
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 661..719
score: 9.959
NoneNo IPR availableGENE3D2.30.30.140coord: 834..900
e-value: 2.4E-17
score: 62.2
NoneNo IPR availableGENE3D2.30.30.140coord: 659..700
e-value: 2.0E-8
score: 33.5
coord: 428..477
e-value: 4.4E-14
score: 51.6
NoneNo IPR availableGENE3D2.40.50.90coord: 901..1003
e-value: 6.6E-10
score: 38.7
coord: 478..571
e-value: 2.4E-24
score: 85.2
coord: 701..794
e-value: 6.5E-12
score: 45.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1060..1083
NoneNo IPR availableCDDcd04508TUDORcoord: 665..710
e-value: 8.08662E-5
score: 40.6592
NoneNo IPR availableCDDcd04508TUDORcoord: 864..912
e-value: 7.74419E-15
score: 69.9343
NoneNo IPR availableCDDcd04508TUDORcoord: 434..487
e-value: 2.0125E-10
score: 57.2227
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 834..935
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 638..731
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 405..508
IPR025605OST-HTH/LOTUS domainPFAMPF12872OST-HTHcoord: 9..72
e-value: 0.0031
score: 17.3
IPR025605OST-HTH/LOTUS domainPROSITEPS51644HTH_OSTcoord: 11..85
score: 10.097
IPR025605OST-HTH/LOTUS domainPROSITEPS51644HTH_OSTcoord: 237..306
score: 9.041

Blast
BLAST of TCONS_00010896-protein vs. Swiss-Prot (Human)
Match: TDRD1 (Tudor domain-containing protein 1 OS=Homo sapiens GN=TDRD1 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 2.366e-29
Identity = 140/583 (24.01%), Postives = 260/583 (44.60%), Query Frame = 0
Query:  398 FFVQLENSTI----HILVQEMQDFYNKIAADQYCIAKPKVGEYCVSRFTQDKSWFRAKILSVKEQFNTINKSYRCHVFYPDYGNDEYVLSTELKSLTKDFCDLPCQAIQCCLNNIIPIEGTDWNENAINYFKELVDDIELNLKVIENLG---TVLSVDLSDGDGKSVCQHLCTQEYAKEIQPTAPNSPSET--RTLPTRLSR-----SLSLEPTDVLIKASWVKPPSEEFVDLCVTHIVSSCTVYAKLVGTEYHEKLDLLETAINNSFENASVKPAAILETGQYYVAL--HDDEWFRAQLLSIDEENDDYTMFLVDSGKETIVSKEEIKNIQPKFLRLPFQAIKCNLKDVPERSDIEILSYMTAVLLGKANLGCIYEKNVDTSSETVSKVVLCIYDDFSQDGLEINTVLIE---KIEEENKLVPRLPEIEEEACA-GFLTHIN-----------------------EDNDFFIQIMGH-GLERLDTITKDISSHFSQHSRAAEIIATPDIGQLCCAKWPKASNWYRARVTQIFYPQRKVEVEFIDYGNTEVIHMVLIRKPLAVSQSVVTLPFQAIKVKLDGVQ 936
            F+VQL +S +    + L   +++ Y  +    Y    P  GE C++++T D++W RA I +V  Q        + HV Y DYGN+E +    +  L ++    P  AI+C + N+IP EG +W+ + I   K L+ +   ++K+++ L       +V++   +   +  H+   E    ++P+  +S  E   ++ P  + +     ++ ++ +D++ K   +    +EF  + V HI +    + + +  +   KL  L+ +++   +    +       G    A    DD+W+RA +L+   E +   +  VD G   I+S   +  I PK L LP QAIKC L  V  +  + I +     L+ K     I    V    E  S V L   D      + ++ VL++    + E++ +  +  +++E +   G    +N                          +F+  ++    L++L+ + K ++ H  Q           +IGQ CCA +    +WYRA V +I  P   V+V F+DYGN E +    +R    +S + + LPFQ I+ +L  +Q
Sbjct:  279 FYVQLYSSEVLEYMNQLSASLKETYANVHEKDYI---PVKGEVCIAKYTVDQTWNRAIIQNVDVQ------QKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANVIPAEG-NWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHVLI-EMGYGLKPSGQDSKKENADQSDPEDVGKMTTENNIVVDKSDLIPKVLTLN-VGDEFCGV-VAHIQTPEDFFCQQL--QSGRKLAELQASLSKYCDQLPPRSDFYPAIGDICCAQFSEDDQWYRASVLAYASE-ESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAGV--KPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVEL--IDKSETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVKETSVPLGVEGKVNPLEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLAEHCQQKLPNG---FKAEIGQPCCAFFAGDGSWYRALVKEIL-PNGHVKVHFVDYGNIEEVTADELR---MISSTFLNLPFQGIRCQLADIQ 834          

HSP 2 Score: 109.383 bits (272), Expect = 4.730e-24
Identity = 99/370 (26.76%), Postives = 161/370 (43.51%), Query Frame = 0
Query:  383 DQLKVYVCHIEDMNRFFVQLENSTIHILVQEMQDFYNKIA------ADQYCIAKPKVGEYCVSRFTQDKSWFRAKILSVKEQFNTINKSYRCHVFYPDYGNDEYVLSTELKSLTKDFCDLPCQAIQCCLNNIIPIEGTDWNENAINYFKELVDDIELNLKVI---ENLGTVLSVDLSDGDGKSVCQHLCTQEYAKEIQPTAPNSPSETRTLPTRLSRSLSLEPTDVLIKASWVKPPSEEFVDLCVTHIVSSCTVYAKLVGTEYHEKLDLLETAIN--------NSFENASVKPAAILETGQYYVALHDDEWFRAQLLSIDEENDDYTMFLVDSGKETIVSKEEIKNIQPKFLRLPFQAIKCNLKDVPERS 735
            D+    V HI+    FF Q   S   +   E+Q   +K        +D Y    P +G+ C ++F++D  W+RA +L+   + + +       V Y DYGN E +    L  +     +LP QAI+C L  + P  G  W   AI   K+LV +  + +KV+   EN   V  +D S+    SV + L    +A   Q    + PS+ +     L     + P    ++ +WV+   ++ VD+ V  I S    Y  ++  +  +KL+ L  ++         N F+    +P      G       D  W+RA +  I   N    +  VD G    V+ +E++ I   FL LPFQ I+C L D+  R+
Sbjct:  494 DEFCGVVAHIQTPEDFFCQQLQSGRKL--AELQASLSKYCDQLPPRSDFY----PAIGDICCAQFSEDDQWYRASVLAYASEESVL-------VGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAGVKPSLGI-WTPEAICLMKKLVQNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVKETSVPLGVEGKVNP----LEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLAEHCQQKLPNGFKAEIGQPCCAFFAG-------DGSWYRALVKEI-LPNGHVKVHFVDYGNIEEVTADELRMISSTFLNLPFQGIRCQLADIQSRN 837          

HSP 3 Score: 82.4185 bits (202), Expect = 9.718e-16
Identity = 88/315 (27.94%), Postives = 139/315 (44.13%), Query Frame = 0
Query:  430 KPKVGEYCVSRFTQDKSWFRAKILSVKEQFNTINKSYRCHVFYPDYGNDEYVLSTELKSLTKDFCDLPCQAIQCCLNNIIPIEGTDWNENAINYFKELVDDIELNLKVIENLGTVLSVDLSDGDGKSVCQHLCTQEYAKEIQPTAPNSPSETRTLPT-RLSRSLSLEPTDVLIKAS-----W--VKPPSEEFVDLCVTHIVSSCTVYAKLVGT-EYHEKLDLLETAINNSFENASVKPAAILETGQYYVALH--DDEWFRAQLLSIDEENDDYTMFLVDSGKETIVSKEEIKNIQPKFLRLPFQAIKCNLKDVPE 733
            K ++G+ C + F  D SW+RA    VKE    I  +    V + DYGN E V + EL+ ++  F +LP Q I+C L +I       W+E AI  F+  V  I+L  +V+E     + V+L+D    S C      +   + +     S S  + LP  RL     L+     ++A+     W  ++ P ++ +   V  I+S    YA   G  E  EKL +L   +         +P      G    A +  DD W+RA +L   +   D  +   D G    +    ++ I    L LPFQ I+C+L+ + E
Sbjct:  762 KAEIGQPCCAFFAGDGSWYRA---LVKE----ILPNGHVKVHFVDYGNIEEVTADELRMISSTFLNLPFQGIRCQLADIQS-RNKHWSEEAITRFQMCVAGIKLQARVVEVTENGIGVELTD---LSTCYPRIISDVLID-EHLVLKSASPHKDLPNDRLVNKHELQVHVQGLQATSSAEQWKTIELPVDKTIQANVLEIISPNLFYALPKGMPENQEKLCMLTAELLEYCNAPKSRPPYRPRIGDACCAKYTSDDFWYRAVVLGTSD--TDVEVLYADYGNIETLPLCRVQPITSSHLALPFQIIRCSLEGLME 1062          
The following BLAST results are available for this feature:
BLAST of TCONS_00010896-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TDRD12.366e-2924.01Tudor domain-containing protein 1 OS=Homo sapiens ... [more]
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