TCONS_00010724-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00010724-protein
Unique Name	TCONS_00010724-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	757

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00010724-protein ID=TCONS_00010724-protein|Name=TCONS_00010724-protein|organism=Clytia hemisphaerica|type=polypeptide|length=757bp
MADEIETTFDIDINSITDFDQIKKLHGTLQKQECLLDEELDTILENHHEI
DCKIQSIQKLLPNLSVLTKEASHLSDVIERTSSLAEKVSSKVRELDIAKG
RVQEAIKRVDDILDLKSCVDGVQDSLKDEQYETAAIYISRYLSLDERAMR
EILPVDTEEADLNASFTYLHQAQEKLQNVVKLKFDEAINRRNEGQVARFL
KLFPMVGIQDVGLSKFSKYLRSQIAEAADLRIDAALKIPSGDRKSNIIFA
ETLTKLFENIARMIEDHQPLVDTYYGPGKMLTVLRELQAECDSQAKHIIQ
EFLTSRKFEKVKEDINRSLKSVPKSQRSTEVKEKFDPKELDILLGEIVLL
SARTELYQNFLKKRIQSDLESIPEDERPEADPDKLKDILLSNCGLSRKLQ
TVMGDYVEMEGYFMKEMLLKAISMDASDEDSLTSSMVDDAFFILQKSLRR
TLSTSNLDIMCAVLNNASSIITTNYQSYFKGKVKSLGFLSGSIAEFSGMI
QGKLQIQTTPIVDLISSKKEFLMILNNIDTSSEYLKKLIDEIVMHCKQQW
KDKESEKLESCIVDLGACGHGFKEILQNGVTQLCSNMILPRLNPLLDGFV
SISHNIDEDEYANYESNDPFVQMFIATLDGALVLLKKVLTESNYESTISL
ACHEIAQRMEKVVLKSSFNRLGGLQFDKELRSLIQYLTSITEWTVRDKFA
RLSQIATILNLEKVTELMEYWGENSGPLTWRLTPSEVRIVLALRNDFRSE
EIQRLKL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006011	XLOC_006011	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00010724	TCONS_00010724	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013167	COG_su4

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013167	Conserved oligomeric Golgi complex, subunit 4	SMART	SM00762	cog4.2seq4	coord: 169..484 e-value: 7.5E-91 score: 317.8
IPR013167	Conserved oligomeric Golgi complex, subunit 4	PFAM	PF08318	COG4	coord: 169..481 e-value: 1.2E-89 score: 300.6

Blast

[Close]

BLAST of TCONS_00010724-protein vs. Swiss-Prot (Human)
Match: COG4 (Conserved oligomeric Golgi complex subunit 4 OS=Homo sapiens GN=COG4 PE=1 SV=3)

HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0
Identity = 328/765 (42.88%), Postives = 503/765 (65.75%), Query Frame = 0

Query:   13 INSITDFDQIKKLHGTLQKQECLLDEELDTILENHHEIDCKIQSIQKLLPNLSVLTKEASHLSDVIERTSSLAEKVSSKVRELDIAKGRVQEAIKRVDDILDLKSCVDGVQDSLKDEQYETAAIYISRYLSLDERAMREILPVDTEEADLNASFTYLHQAQEKLQNVVKLKFDEAINRRNEGQVARFLKLFPMVGIQDVGLSKFSKYLRSQIAEAADLRIDAALKIPSGDRKSNIIFAETLTKLFENIARMIEDHQPLVDTYYGPGKMLTVLRELQAECDSQAKHIIQEFLTSRKFEKVKEDINRSLKSVPKSQRSTEVKEKFDPKELDILLGEIVLLSARTELYQNFLKKRIQSDLE---SIPEDERPEADPDKLKDILLSNCGLSRKLQTVMGDYVEMEGYFMKEMLLKAISMDASDEDSLTSSMVDDAFFILQKSLRRTLSTSNLDIMCAVLNNASSIITTNYQSYFKGKVKSLGFLSGSIAEF------------SGMIQGKLQIQTTPIVDLISSKKEFLMILNNIDTSSEYLKKLIDEIVMHCKQQWK-----DKESEKLESCIVDLGACGHGFKEILQNGVTQLCSNMILPRLNPLLDGFVSISHNIDEDEYANYESNDPFVQMFIATLDGALVLLKKVLTESNYESTISLACHEIAQRMEKVVLKSSFNRLGGLQFDKELRSLIQYLTSITEWTVRDKFARLSQIATILNLEKVTELMEYWGENSGPLTWRLTPSEVRIVLALRNDFRSEEIQRLKL 757
            I S+T+  +++ ++  L  +E +++ ELD +LE  + I+ K+ ++ ++ PNL ++  +A  L+ +I  T +LAE VSSKVR+LD+AK R+ +AI+R DDILDLK C+DGVQ +L+ E YE AA +  RYL LD +++ E+     E + ++A+   L +A+++L+ +V  KF  A    +  QV RF K+FP++G+ + GL KFS+YL  Q+A  A+  +   L     DR++ +IFA+TLT LFE IAR++E HQP+V+TYYGPG++ T+++ LQ ECD Q + ++ +F+  R       D ++  + V  +       EK +P+ELD +L E+ L++AR+ELY  FLKKRI SD E   S+  +E  + +  K  D LL+NC LS  +Q ++G YV ME YFM+E + KA+++D  ++  LTSSMVDD F+I++K + R LS+S++D +CA++N A++ + ++++     K++ +GF + +  +             S + QGK   +     D   +K  FL+ LNN++  SE +  L   +   C + +      ++   K +SC+ DL A  + F+++LQ G+T+L S  I P++ P ++ F S+SHNI+E+E+ +YE+NDP+VQ FI  L+  +   K  L+   Y+S   L    +A  +EKVVLKS+FNRLGGLQFDKELRSLI YLT++T WT+RDKFARLSQ+ATILNLE+VTE+++YWG NSGPLTWRLTP+EVR VLALR DFRSE+I+RL+L
Sbjct:   33 IRSLTELQELEAVYERLCGEEKVVERELDALLEQQNTIESKMVTLHRMGPNLQLIEGDAKQLAGMITFTCNLAENVSSKVRQLDLAKNRLYQAIQRADDILDLKFCMDGVQTALRSEDYEQAAAHTHRYLCLD-KSVIELSRQGKEGSMIDANLKLLQEAEQRLKAIVAEKFAIATKEGDLPQVERFFKIFPLLGLHEEGLRKFSEYLCKQVASKAEENLLMVLGTDMSDRRAAVIFADTLTLLFEGIARIVETHQPIVETYYGPGRLYTLIKYLQVECDRQVEKVVDKFIKQR-------DYHQQFRHVQNNLMRNSTTEKIEPRELDPILTEVTLMNARSELYLRFLKKRISSDFEVGDSMASEEVKQ-EHQKCLDKLLNNCLLSCTMQELIGLYVTMEEYFMRETVNKAVALDTYEKGQLTSSMVDDVFYIVKKCIGRALSSSSIDCLCAMINLATTELESDFRDVLCNKLR-MGFPATTFQDIQRGVTSAVNIMHSSLQQGKFDTKGIESTD--EAKMSFLVTLNNVEVCSENISTLKKTLESDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFRDLLQEGLTELNSTAIKPQVQPWINSFFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSLVAVELEKVVLKSTFNRLGGLQFDKELRSLIAYLTTVTTWTIRDKFARLSQMATILNLERVTEILDYWGPNSGPLTWRLTPAEVRQVLALRIDFRSEDIKRLRL 785

The following BLAST results are available for this feature:

BLAST of TCONS_00010724-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00010724-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
COG4	0.000e+0	42.88	Conserved oligomeric Golgi complex subunit 4 OS=Ho...	[more]

You are here

TCONS_00010724-protein (polypeptide) - C. hemisphaerica