TCONS_00010641-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010641-protein
Unique NameTCONS_00010641-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010641-protein ID=TCONS_00010641-protein|Name=TCONS_00010641-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
MGIMHSIFKQFIGKKEIRILMVGLDAAGKTTILYKLKLGEVVLSIPTIGF
NVETVEYKNINFTVWDVGGQHKIRPLWRHYFSNTQGIIFVVDSNDRERIG
EAKEELDNMLNDHDLRDASLLVFANKQDLPNALSASQITEKLGLLDIRNR
SWYTQATCAGNGNGLYEGLDWLAEDLKKKKVM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005960XLOC_005960Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010641TCONS_00010641Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 118..139
score: 32.09
coord: 46..70
score: 33.65
coord: 18..41
score: 52.7
coord: 73..98
score: 35.97
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 5..175
e-value: 7.8E-75
score: 250.0
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..176
e-value: 2.2E-26
score: 103.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 17..179
e-value: 8.1E-4
score: -62.1
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..180
e-value: 1.5E-114
score: 396.6
NoneNo IPR availablePIRSFPIRSF0007096PFK_fruc_bisph_Ptasecoord: 4..112
e-value: 0.0093
score: 12.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..182
e-value: 9.8E-49
score: 164.6
NoneNo IPR availableCDDcd04150Arf1_5_likecoord: 17..173
e-value: 3.28132E-108
score: 308.182
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 15..140
e-value: 5.4E-23
score: 79.5
IPR024156Small GTPase superfamily, ARF typePROSITEPS51417ARFcoord: 10..176
score: 23.721
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..180

Blast
[Close]
BLAST of TCONS_00010641-protein vs. Swiss-Prot (Human)
Match: ARF3 (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 1.758e-100
Identity = 136/178 (76.40%), Postives = 157/178 (88.20%), Query Frame = 0 
Query:    3 IMHSIFKQFIGKKEIRILMVGLDAAGKTTILYKLKLGEVVLSIPTIGFNVETVEYKNINFTVWDVGGQHKIRPLWRHYFSNTQGIIFVVDSNDRERIGEAKEELDNMLNDHDLRDASLLVFANKQDLPNALSASQITEKLGLLDIRNRSWYTQATCAGNGNGLYEGLDWLAEDLKKKK 180
            I  ++ K  IGKKE+RILMVGLDAAGKTTILYKLKLGE+V +IPTIGFNVETVEYKNI+FTVWDVGGQ KIRPLWRHYF NTQG+IFVVDSNDRER+ EA+EEL  ML + +LRDA LLVFANKQDLPNA++A++IT+KLGL  +R+R+WY QATCA +G+GLYEGLDWLA  LK KK
Sbjct:    4 IFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181
The following BLAST results are available for this feature:
BLAST of TCONS_00010641-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARF31.758e-10076.40ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
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