TCONS_00010395-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010395-protein
Unique NameTCONS_00010395-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length849

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010395-protein ID=TCONS_00010395-protein|Name=TCONS_00010395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=849bp
MSRGGKQGYENSTQMSKMLPASNIYRVGDYVYVETQPSHPYQIRRIEELT
KTSNGQVEAKVSCFYRRRDLSNVLGREADKHVQSAEIEGEINVGSDILSD
EQNHQLKLREVFLSRQLEIINANTIRGKCSVTLYSEVEALLDYLKEEDWF
YYLLVYDPQQKTLLADRGEIGVGDEYQTEVEDEMAKGELQNNDELETLVW
DPENPLSDKQVDQFLVISRSIGTFARALDTSSSSKESSLHLSAAAASRDI
TLFQALTLLHKSNYDVGKASLSLVPDGGPILCRDEMEEWTSGEATLFEEG
IRKHGKEFNEIQQEYLPWKSISSIIEYYYMWKTTDKYVQQKRMKAQEGDS
KVTQIFIPSSNTAINLTLAIQASSQYQVTPSGSLVTPNYMCESCFCKESV
LWYPWGPATSSCKLYLCKDCWVYWKKCGGLKKSTKSNESGNDAKEACYKC
RICNKKFNRAERLSSHMATHRGYDCTEPGCGKTFNLKAHLTRHLAKAHGI
YTLDSKLKVKTPFVMSPTPYMRATRRLCKATLRLRHFSRSPTDTIDNIEV
KNEALKVVTVEKAKSLIDKPLKKRVVALDSVLSVLKKLSASNKANSQNAS
QDNSPGSRSAAFSHTSTSITQNLKAKSLKSPTPIMPGGHKRPADQDSNDT
PSAKRQQQMQASSPLGRKGYGCAECGKVLHSQVSLQHHMQMHHTDREQVA
PQIHVPQKDGHKRHYQQHYHDMPPQHQSYSSHHPMNQHYPDVNGGSRSVA
KSSRTPTGSTSRKQSYKGIVQQNRRDPDLQYVDPPQEFLFNATKESRKSR
RSLPSRVQRKIARKPFVQIKCSQELRDSITCKKNDMKTKTADPIVIDDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005843XLOC_005843Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010395TCONS_00010395Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000949ELM2_dom
IPR000679Znf_GATA
IPR001025BAH_dom
IPR013087Znf_C2H2_type
IPR001005SANT/Myb
IPR013083Znf_RING/FYVE/PHD
IPR017884SANT_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003682chromatin binding
GO:0003676nucleic acid binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000949ELM2 domainSMARTSM01189ELM2_2coord: 170..222
e-value: 1.4E-11
score: 54.5
IPR000949ELM2 domainPFAMPF01448ELM2coord: 170..220
e-value: 5.8E-10
score: 39.7
IPR000949ELM2 domainPROSITEPS51156ELM2coord: 168..277
score: 26.958
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 385..441
e-value: 0.0012
score: 17.4
IPR001025Bromo adjacent homology (BAH) domainSMARTSM00439BAH_4coord: 23..167
e-value: 2.3E-24
score: 96.9
IPR001025Bromo adjacent homology (BAH) domainPFAMPF01426BAHcoord: 24..166
e-value: 5.0E-26
score: 90.9
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 23..167
score: 19.365
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 473..498
e-value: 0.0016
score: 27.7
coord: 670..692
e-value: 0.0092
score: 25.2
coord: 448..470
e-value: 2.5E-4
score: 30.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 475..498
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 450..470
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 672..693
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 448..472
score: 11.635
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 473..498
score: 10.949
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 670..697
score: 11.593
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 445..493
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 666..696
IPR001005SANT/Myb domainSMARTSM00717santcoord: 285..334
e-value: 1.2E-5
score: 34.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 448..470
e-value: 1.8E-4
score: 21.7
coord: 473..498
e-value: 0.002
score: 18.4
NoneNo IPR availableGENE3D3.30.160.60coord: 462..487
e-value: 9.4E-11
score: 41.5
NoneNo IPR availablePFAMPF17226MTA_R1coord: 508..579
e-value: 1.2E-9
score: 38.1
NoneNo IPR availableGENE3D3.30.160.60coord: 535..679
e-value: 2.8E-5
score: 23.9
NoneNo IPR availableGENE3D3.30.160.60coord: 488..533
e-value: 0.013
score: 15.3
NoneNo IPR availableGENE3D1.10.10.60coord: 279..338
e-value: 1.8E-10
score: 40.1
NoneNo IPR availableGENE3D3.30.160.60coord: 431..461
e-value: 1.4E-5
score: 24.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..813
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..666
NoneNo IPR availableCDDcd11661SANT_MTA3_likecoord: 288..333
e-value: 1.1069E-21
score: 88.8254
NoneNo IPR availableCDDcd04709BAH_MTAcoord: 22..188
e-value: 1.7565E-64
score: 213.022
NoneNo IPR availableCDDcd00202ZnF_GATAcoord: 391..444
e-value: 3.51018E-6
score: 44.2858
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 680..722
e-value: 0.0035
score: 16.8
IPR017884SANT domainPROSITEPS51293SANTcoord: 284..336
score: 17.493
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 287..339

Blast
[Close]
BLAST of TCONS_00010395-protein vs. Swiss-Prot (Human)
Match: MTA3 (Metastasis-associated protein MTA3 OS=Homo sapiens GN=MTA3 PE=1 SV=2)

HSP 1 Score: 506.523 bits (1303), Expect = 1.513e-170
Identity = 261/546 (47.80%), Postives = 352/546 (64.47%), Query Frame = 0 
Query:   21 ASNIYRVGDYVYVETQPSHPYQIRRIEELTKTSNGQVEAKVSCFYRRRDLSNVLGREADKHVQSAEIEGEINVGSDILSDEQNHQLKLREVFLSRQLEIINANTIRGKCSVTLYSEVEALLDYLKEEDWFYYLLVYDPQQKTLLADRGEIGVGDEYQTEVEDEMAKGELQNNDE--LETLVWDPENPLSDKQVDQFLVISRSIGTFARALDTSSSSKESSLHLSAAAASRDITLFQALTLLHKSNYDVGKASLSLVPDGGPILCRDEMEEWTSGEATLFEEGIRKHGKEFNEIQQEYLPWKSISSIIEYYYMWKTTDKYVQQKRMKAQEGDSKVTQIFIPSS--------NTAINLTLAIQASSQYQVTPSGSLVTPNYMCESCFCKESVLWYPWGPATSSCKLYLCKDCWVYWKKCGGLKKSTKSNESGNDAKEACYKCRICNKKFNRAERLSSHMATHRGYDCTEPGCGKTFNLKAHLTRHLAKAHGIYTL---DSKLKVKTPFVMSPTPYMRATRRLCKATLRLRHFSRSPTDTIDNIEVKNE 553
            A+N+YRVGDYVY E   S+PY IRRIEEL KT++G VEAKV CFYRRRD+SN L   ADKH +  E E E  V +D L+D+Q HQLK RE+FLSRQ E + A  IRGKCSV L +E E++L YL +ED F+Y LVYDP  KTLLAD+GEI VG  YQ ++ + + +GE    ++  LE  VWDP +PL+D+Q+DQFLV++R++GTFARALD SSS ++ SLH+SAAAASRDITLF A+  L++ +YD+  A   LVP GGP+LCRDEMEEW++ EA+LFEE + K+GK+FN+I+Q++LPWKS++SIIEYYYMWKTTD+YVQQKR+KA E +SK+ Q++IP+         +T+     A+  +      P   L+     CESC+  +S  WY WGP    C+  LC  CW+YWKK GGLK  T+S E                      E+LS    T       +P       +++H++R   +   +       S +K +  F +  T + +  R++CK TLRLR  +R P   I+   ++ E
Sbjct:    2 AANMYRVGDYVYFENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISNTLIMLADKHAKEIEEESETTVEAD-LTDKQKHQLKHRELFLSRQYESLPATHIRGKCSVALLNETESVLSYLDKEDTFFYSLVYDPSLKTLLADKGEIRVGPRYQADIPEMLLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRDEMEEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPTYSKPNPNQISTSNGKPGAVNGAVGTTFQPQNPLL--GRACESCYATQSHQWYSWGPPNMQCR--LCAICWLYWKKYGGLKMPTQSEE----------------------EKLSPSPTTE------DP------RVRSHVSRQAMQGMPVRNTGSPKSAVKTRQAFFLHTTYFTKFARQVCKNTLRLRQAARRPFVAINYAAIRAE 508
The following BLAST results are available for this feature:
BLAST of TCONS_00010395-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTA31.513e-17047.80Metastasis-associated protein MTA3 OS=Homo sapiens... [more]
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